Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2110 ACAAAGCTCATCGTCGGCGTTTGCACTCTCTCCTCTGTCGGTGCTCCCTCCGTCGTCTCCCCTAACCCGTCTCTGCTGGTGCTCGCATTCCCTGCGCTCACTACTCACGGTGTCGGTCAGCCAATGGAGGTCGCCTTTCCTTCCTCCGCGCTGTTAGTCTCTGCCCTCCTCCCTCTCAATGCATATTTTGACTGTTCCGTCGCCGCCGCTAGAAGAGCACTCAACTGCAACAAAGGCAACGATTGGCCTTCTGCTTCCGGCGCTCACCAAGCCCGCTATCTCTGCGCTATCGATGCCAAGGTCGTCGAGAGAAAGGATCACCTCGCTAAGCTTGAATCCCTTGATTGCGGAAAACCACTCGATGAAGCTGCCTGGGACATGGATGATGTTGCTGGTTGCTTCGAGTTTTACGCTGACCTTGCCGAGAAACTCGAGGCTAAGCAGAAGGCACCCGTTTCTCTTCCCATGGAAACTTTCAAGAGAGAAATACATGATAGTTTGATCTGTGTGATTATTGTAAAGATCATTCAATGGGAAACTAATGAGGATTTGATCATATCAATATTGGGCCATCGAAATGCTGCTCAGAGGAAGCTGATTCGAGAAACTTATTTTGAGGCTTATGGAGAAGATCTCCTCAAGGCCTTGGACAAGGAGCTCAGCAATGACTTCGAGATCAGTACCATAGAATTATGGAGACATTTGTTTTTAATCTTTTGGAAGGCTTATCATGCTCGTTATAAGAAGTCTCTCGAGGAAGATGTTGCTCATCACACAACTGGGAGTTCCGTAAGTGCTCTGATTTCTTTTGGTCATCTTAGATATCTTCATTTGTTAATTGTTATGTTAATAGATCACGCTTTAAGTTTTATGGTTATTCATATTGGGGGTGAAACAAATCTTAAGTTTATATACTGCGCAGCTGCTTGCTTCCATGGTGGACGTGATGATCCGATACCCAGTCCATTTCACCCGTTGACAGATGGCAGCACCCAGCCCATAATTCATGTACTCACCAGGTATGATCTCTTGACCCTGCTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTACTTGGGAGAGAGTCAACCTAATGGAAACAGTCATAAATCAACTAATCCATTTGATTTTCTTGATGATGCTGATGTATCAGATGTAGAGCACGGTAATATGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGAGTTCCTCACAGCCATACCAAGCTTTATGTACGATCCAAGGAAAGGAAGTTTGAGAGGGCTAGAGGAAGGATGAACAACAAAGAACTTAGAGTTTAA 1302 0.4585 TKLIVGVCTLSSVGAPSVVSPNPSLLVLAFPALTTHGVGQPMEVAFPSSALLVSALLPLNAYFDCSVAAARRALNCNKGNDWPSASGAHQARYLCAIDAKVVERKDHLAKLESLDCGKPLDEAAWDMDDVAGCFEFYADLAEKLEAKQKAPVSLPMETFKREIHDSLICVIIVKIIQWETNEDLIISILGHRNAAQRKLIRETYFEAYGEDLLKALDKELSNDFEISTIELWRHLFLIFWKAYHARYKKSLEEDVAHHTTGSSVSALISFGHLRYLHLLIVMLIDHALSFMVIHIGGETNLKFIYCAAACFHGGRDDPIPSPFHPLTDGSTQPIIHVLTRYDLLTLLAWGVLYRFFFYLGESQPNGNSHKSTNPFDFLDDADVSDVEHGNMEAVKHFGPAPGVPHSHTKLYVRSKERKFERARGRMNNKELRV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2110 433 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 64 179 - -
Amo18g2110 433 Gene3D Annexin 177 231 IPR037104 GO:0005509|GO:0005544
Amo18g2110 433 SUPERFAMILY Annexin 177 268 IPR037104 GO:0005509|GO:0005544
Amo18g2110 433 Gene3D - 383 432 - -
Amo18g2110 433 SMART annex3 179 231 IPR018502 GO:0005509|GO:0005544
Amo18g2110 433 ProSiteProfiles Annexin repeat profile. 157 241 IPR018502 GO:0005509|GO:0005544
Amo18g2110 433 SUPERFAMILY ALDH-like 64 153 IPR016161 GO:0016491
Amo18g2110 433 Pfam Aldehyde dehydrogenase family 66 153 IPR015590 GO:0016491
Amo18g2110 433 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 172 IPR016162 GO:0016491
Amo18g2110 433 Pfam Annexin 177 225 IPR018502 GO:0005509|GO:0005544
Amo18g2110 433 Pfam Ribosomal protein 60S L18 and 50S L18e 391 432 IPR021131 -
Amo18g2110 433 Coils Coil 412 432 - -
Amo18g2110 433 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 64 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2110 Amo-Chr18 57197889 57202985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2110 64 171 Aldehyde Dehydrogenase Gene Family AT1G74920 70.370 8.81e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2110 K00130 - aip:110265331 229.565