Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2107 ATGCCCAAACAACAGGACCTCAACGGTGGCTGTACCGGTGGCGAAGGTGGTCATCATCACTTTGGCATATCCAGTTTGCTCGCGAAGAAACCGGCAGCAGCGAAGAAAGATAGGCACAGCAAGATTTACACCGCTCAGGGGCTGAGGGACCGAAGGGTGAGGCTATCGATCGAGATCGCGCGCAAGTTCTTCGATCTCCAAGACATGCTAGGGTTTGATAAGGCCAGCAACACGCTCGACGGCTCTTCACCAAGTCCAAGAAAGCCATTAAGGAGCTTGCCAGGACTCAGGAGCAAGAACCACAGCGCCAGTGACGAAGCCGAAGCCGAAGCCGAAGCCGGTGCCAATAACAAGAGTTTTGCCTCGTCCTCTTACTGCGACGAAGATGACTTTGAAGTGCTTTCTAGAAACAACCATCACCGCCACCAACAACAAGGGTTAGTTTGTGTCTTTGAGAGTGAATACAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCCGTGAATCGTGGGCTTGATAAGGCCGATAAAGCACAAGCAGACAGCTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTCCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGCAAAGACTTACATAACCACATTAGTAAGACTAGGCGTGGCAAAGTGAAAGACGGTGATGCATTTACTGCGTTGGCCTATCTATTTTCTAAGGCAGACATTGACCCGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGATTGGATAATTTGGTGTGGGCTGATGGAGAAAGCGTTGTTGATTACAAATATTTTGGCGATGTATTGGCTTTTGACACCACTTACAAGAAAAATTGGAGACATTGTTGA 888 0.4707 MPKQQDLNGGCTGGEGGHHHFGISSLLAKKPAAAKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDGSSPSPRKPLRSLPGLRSKNHSASDEAEAEAEAGANNKSFASSSYCDEDDFEVLSRNNHHRHQQQGLVCVFESEYNHPLCPPKYRHLIAVNRGLDKADKAQADSLRACGVKTCHIMGYMVSQKGGYDKVGFTSKDLHNHISKTRRGKVKDGDAFTALAYLFSKADIDPLFLGKFTLKDGRLDNLVWADGESVVDYKYFGDVLAFDTTYKKNWRHC* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2107 295 ProSiteProfiles TCP domain profile. 35 93 IPR017887 -
Amo18g2107 295 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 15 147 - -
Amo18g2107 295 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 147 IPR005333 GO:0003700
Amo18g2107 295 Pfam TCP family transcription factor 34 127 IPR017887 -
Amo18g2107 295 MobiDBLite consensus disorder prediction 75 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2107 Amo-Chr18 56676105 56679173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2107 33 106 TCP Transcription Factor Family AT1G67260 63.514 2.16e-21 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo18g2107 TCP 1.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2107 - - ahf:112778948 271.166