Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2095 AAGAAAAAGGCAAATCAAGCTCTACCCACCCATTTACCCAGCCCCGCTGCCCGCAGCACTGCAGCCACGCCAACCACCGCAGCCACCTCAATTTTGGTGTATCTTCGTTTTTGGGAGATGGATCCGTCGGATAGCGATTTTTTCGGATCAGACTCCGATGTTGGGTTCCCTAGAGGAGACGATCTAGACTTTTTAGACGACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGCTCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACATTTTTGGAGTGCCAGAGATTCATCATGTGGTTGAGTTTGACAGAGTTCGGGGGATTCTCCGTTGCGAGTGTCTGTGGTTCGAAAATAGAGGAATTCCCTGCATGCATATATTCGCCTGCCTAAAGCACCAACACGTTGAAGTTATTCCAGAAAGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATTTGGCCTGTAAGAATTCAAGTGATTTTGTCGAAGCAATGAATAGTGTTGTCGACACAATTACAAAACTCCAAAAGCGAGGTGAAAATCCACGTAACGCTAACTTAGACGATGACTGCGTTGGTGACCCATTGGTGGTGAAGAGTAAGGGAGCTCCCAAGAAAAACTCAAAATTCAAGCAACAGAGAAATTGTCCTAATGCTCCTGGTAGAATCCCAAAGGAGCCAGTAGACGATGATACAGAAACGAATATCAGCAGCATCCTCCCTAAGCACAAAAGACATGACAGTGTGAAAAATCAGCATAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAGCACCAACCTCAGCAGCTAAGTCGGCTTTTATTGATCAAGTGAAAACATCAAGTCTTGGTCCCAATATCCCGGTTTGTGCGTCTACAAGTAACGAAGAGTCCGGGATGGGTTCCATACCAGCTGGGTCTTCTGTTGTGGCCCCTGAAACTGGAATGGCAGCTTGA 1770 0.4514 KKKANQALPTHLPSPAARSTAATPTTAATSILVYLRFWEMDPSDSDFFGSDSDVGFPRGDDLDFLDDDSEADEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLDTKIQQWKVVSFYEEHSHELVAPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTAPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQDGGKLYFKCNIFGVPEIHHVVEFDRVRGILRCECLWFENRGIPCMHIFACLKHQHVEVIPESLVCKRWTKNAKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDLACKNSSDFVEAMNSVVDTITKLQKRGENPRNANLDDDCVGDPLVVKSKGAPKKNSKFKQQRNCPNAPGRIPKEPVDDDTETNISSILPKHKRHDSVKNQHKMEKDRNIGGGTAPTSAAKSAFIDQVKTSSLGPNIPVCASTSNEESGMGSIPAGSSVVAPETGMAA* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2095 589 MobiDBLite consensus disorder prediction 1 24 - -
Amo18g2095 589 MobiDBLite consensus disorder prediction 563 589 - -
Amo18g2095 589 Pfam FAR1 DNA-binding domain 102 191 IPR004330 -
Amo18g2095 589 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 198 IPR031052 GO:0006355
Amo18g2095 589 MobiDBLite consensus disorder prediction 514 530 - -
Amo18g2095 589 MobiDBLite consensus disorder prediction 59 78 - -
Amo18g2095 589 MobiDBLite consensus disorder prediction 514 539 - -
Amo18g2095 589 MobiDBLite consensus disorder prediction 472 502 - -
Amo18g2095 589 ProSiteProfiles Zinc finger SWIM-type profile. 332 370 IPR007527 GO:0008270
Amo18g2095 589 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 235 442 - -
Amo18g2095 589 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 83 198 - -
Amo18g2095 589 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 235 442 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2095 Amo-Chr18 54993293 54996305 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g2095 FAR1 1.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2095 - - ahf:112729906 700.279