Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo18g2095 | AAGAAAAAGGCAAATCAAGCTCTACCCACCCATTTACCCAGCCCCGCTGCCCGCAGCACTGCAGCCACGCCAACCACCGCAGCCACCTCAATTTTGGTGTATCTTCGTTTTTGGGAGATGGATCCGTCGGATAGCGATTTTTTCGGATCAGACTCCGATGTTGGGTTCCCTAGAGGAGACGATCTAGACTTTTTAGACGACGATTCAGAGGCTGATGAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGCTGTCTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCCGGCTAGAATTCGTGCAAGACTAGATACAAAAATTCAGCAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCAAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACCGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGCTCCAGTACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGATGGTGGAAAACTATACTTCAAGTGTAACATTTTTGGAGTGCCAGAGATTCATCATGTGGTTGAGTTTGACAGAGTTCGGGGGATTCTCCGTTGCGAGTGTCTGTGGTTCGAAAATAGAGGAATTCCCTGCATGCATATATTCGCCTGCCTAAAGCACCAACACGTTGAAGTTATTCCAGAAAGCTTAGTGTGCAAGCGTTGGACGAAGAATGCCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGGTACTAAAGTGTCGTTTGGGTGTGTTGGGTGCTGAGTGTTCTAGGTTGATGGATTTGGCCTGTAAGAATTCAAGTGATTTTGTCGAAGCAATGAATAGTGTTGTCGACACAATTACAAAACTCCAAAAGCGAGGTGAAAATCCACGTAACGCTAACTTAGACGATGACTGCGTTGGTGACCCATTGGTGGTGAAGAGTAAGGGAGCTCCCAAGAAAAACTCAAAATTCAAGCAACAGAGAAATTGTCCTAATGCTCCTGGTAGAATCCCAAAGGAGCCAGTAGACGATGATACAGAAACGAATATCAGCAGCATCCTCCCTAAGCACAAAAGACATGACAGTGTGAAAAATCAGCATAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAGCACCAACCTCAGCAGCTAAGTCGGCTTTTATTGATCAAGTGAAAACATCAAGTCTTGGTCCCAATATCCCGGTTTGTGCGTCTACAAGTAACGAAGAGTCCGGGATGGGTTCCATACCAGCTGGGTCTTCTGTTGTGGCCCCTGAAACTGGAATGGCAGCTTGA | 1770 | 0.4514 | KKKANQALPTHLPSPAARSTAATPTTAATSILVYLRFWEMDPSDSDFFGSDSDVGFPRGDDLDFLDDDSEADEDRPQDKRIAELSREDIMQLQFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCPARIRARLDTKIQQWKVVSFYEEHSHELVAPLDVSMMPEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKAYVRKKDTLLEFINNMETVVSHYRNNERVAEFNSKYTAPVLVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQDGGKLYFKCNIFGVPEIHHVVEFDRVRGILRCECLWFENRGIPCMHIFACLKHQHVEVIPESLVCKRWTKNAKSDFMKSNVDDPSDSDKVLKCRLGVLGAECSRLMDLACKNSSDFVEAMNSVVDTITKLQKRGENPRNANLDDDCVGDPLVVKSKGAPKKNSKFKQQRNCPNAPGRIPKEPVDDDTETNISSILPKHKRHDSVKNQHKMEKDRNIGGGTAPTSAAKSAFIDQVKTSSLGPNIPVCASTSNEESGMGSIPAGSSVVAPETGMAA* | 590 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 563 | 589 | - | - | |
Amo18g2095 | 589 | Pfam | FAR1 DNA-binding domain | 102 | 191 | IPR004330 | - | |
Amo18g2095 | 589 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 83 | 198 | IPR031052 | GO:0006355 | |
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 514 | 530 | - | - | |
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 59 | 78 | - | - | |
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 514 | 539 | - | - | |
Amo18g2095 | 589 | MobiDBLite | consensus disorder prediction | 472 | 502 | - | - | |
Amo18g2095 | 589 | ProSiteProfiles | Zinc finger SWIM-type profile. | 332 | 370 | IPR007527 | GO:0008270 | |
Amo18g2095 | 589 | PANTHER | PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 | 235 | 442 | - | - | |
Amo18g2095 | 589 | PANTHER | PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 | 83 | 198 | - | - | |
Amo18g2095 | 589 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 235 | 442 | IPR031052 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo18g2095 | Amo-Chr18 | 54993293 | 54996305 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Amo18g2095 | FAR1 | 1.5e-18 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo18g2095 | - | - | ahf:112729906 | 700.279 |