Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2073 ATGTATGCAGAAACCGGRCTTCTCTTKCCACACATGCAGAACTTCTCTAATCACGACCTTCATCAACTCGACGAGTACTGCAACACCTTCAAGTCTAATGCTTCATTGAGTGATCCTGTTCAATCTTCTGTCATGTCGGAGTATGATTTGGCAGCAGAGGGTGATCTGTTCAAAGCCCCGGAACCTGTTTTTGAAGAGTCATTCATGAACCTGGATCCTGTGACAGCAGCCATCTCAATGATATCTTGTGGGGAAGATGTCTRCTCACAGGGACTAAAATCTGCTGATATTGATGTTCTTCAAAAGGAACAGCTTCTGAGTGATGTGTTTTATGAGTGTGAAAAGGATCTCTTAMAAAAGGCAGCAATYGACTTGCCGTTCTCCGATATTCTGGAAATCAAAGTTCCTGTTCTTAACACAGAGGAGAACTCAATTGAAGAAAAGAAACAATTTCTAGACATGCCACCATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGCTACAATGAAGCCTGCTTTCCTCGATGTCCCAGGAATAGATTTCGATGAAGTTTATGGCATGAGGAGATCATTTAGTGAGGGAGATATAAAGACTTTAGGTAATGGCAATCTGAACATAGTCCAGTCTCCCCACGAGAGGCGTTTGCTTATCGGCAGTAGCATCAAAGAGGAACGCCAAGAGAAGCTATCCAGATACAGGAATAAGAAGACAAAGAGGAATTTTGGAAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAGCCTAGAATCCGTGGAAGATTTGCGAAGACCGAAGAATATGATACCAAGAGGCAATGA 852 0.4296 MYAETGLLXPHMQNFSNHDLHQLDEYCNTFKSNASLSDPVQSSVMSEYDLAAEGDLFKAPEPVFEESFMNLDPVTAAISMISCGEDVXSQGLKSADIDVLQKEQLLSDVFYECEKDLLXKAAIDLPFSDILEIKVPVLNTEENSIEEKKQFLDMPPLPKSVSSGSLSSMDWMHGATMKPAFLDVPGIDFDEVYGMRRSFSEGDIKTLGNGNLNIVQSPHERRLLIGSSIKEERQEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEYDTKRQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2073 283 ProSiteProfiles CCT domain profile. 233 275 IPR010402 GO:0005515
Amo18g2073 283 PANTHER CCT MOTIF FAMILY PROTEIN 28 281 - -
Amo18g2073 283 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 281 - -
Amo18g2073 283 Pfam CCT motif 233 275 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2073 Amo-Chr18 53071737 53076158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2073 228 279 C2C2-CO-like Transcription Factor Family AT3G21880 49.057 1.52e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo18g2073 CCT 1.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2073 - - gmx:100814332 423.705