Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2072 ATGGCGAAGCTTGAAGCGAAGCTCGGAATGTTAGTTGACTCCGTTGAGATCTTCAATCTTTTGATCTATTCGCACTCCACTAACCAGATGACTGTAGTTGAGGCATATGTTGGAAGGAACAAATTACATCAACCAGATGACTCATCAAATTTAAATCCGGAAGTTTTATCCTTGATAAACGAGGGCATTGCCCAGAATACTACTGGAAATGTTTTTGTGCCTAAGGAAGGGGGAGAGGCAGAGATTTCAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTAAAGCTCAACTCGTACATATTGCATTTGGGTATGAATTTCAGTCTTCTCAAATCAAATACGATAGATCTCCATGTCTTCCCCTTTAATTCCGAGAAAAAAAGAGGCGATGTTGCTATGAAGCTGTATCAGAGAGGGCTCTGGAGTACATATACATTGGAAAGGAGGGCTCTTGATCACGAGGGATTTGTCGCTAAGGGGCCTAATATGAATGTGGCTTTTGTGACTAAAGAGAAGGAGCTTATAATGCCCCACTTCGATAAAATTCTTAGTGGCTGCACAGCTAAGAGGGTTTTGACGCTTGCCGAGAAGTTGTTGAGCAAGGGTAAGCTTCGTGGGATAAGGATGAAACATGTGACTGTTGAGGAAGGAAAGAGTTCCGCTGAAATGATGCTTATTGGCAGTGGCATTCTTGTTTGCCCTGTAGTGCAGTGGGACGAGCAAGTTATTGGAGATGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGTAAAAGAAAGCTCAGATATTATAATCCTGGATGATAACTTTTCCTCAGTAGTAAAGGTATGTGTTTTATTTATTGGATTGAACATCTATTATATATAA 879 0.4118 MAKLEAKLGMLVDSVEIFNLLIYSHSTNQMTVVEAYVGRNKLHQPDDSSNLNPEVLSLINEGIAQNTTGNVFVPKEGGEAEISGSPTEKAILSWAVKLNSYILHLGMNFSLLKSNTIDLHVFPFNSEKKRGDVAMKLYQRGLWSTYTLERRALDHEGFVAKGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEKLLSKGKLRGIRMKHVTVEEGKSSAEMMLIGSGILVCPVVQWDEQVIGDDIGLSMGIQGTEVVKESSDIIILDDNFSSVVKVCVLFIGLNIYYI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2072 292 Pfam Amino-transferase class IV 153 239 IPR001544 GO:0003824
Amo18g2072 292 Pfam Cation transport ATPase (P-type) 75 138 - -
Amo18g2072 292 PANTHER CATION TRANSPORTING ATPASE 247 281 - -
Amo18g2072 292 PANTHER CATION TRANSPORTING ATPASE 27 139 - -
Amo18g2072 292 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 27 201 IPR023299 GO:0000166
Amo18g2072 292 Gene3D - 28 148 IPR023299 GO:0000166
Amo18g2072 292 Gene3D - 249 279 IPR023214 -
Amo18g2072 292 PANTHER CALCIUM-TRANSPORTING ATPASE 247 281 - -
Amo18g2072 292 PANTHER CALCIUM-TRANSPORTING ATPASE 27 139 - -
Amo18g2072 292 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 153 247 IPR036038 GO:0003824
Amo18g2072 292 SUPERFAMILY HAD-like 246 284 IPR036412 -
Amo18g2072 292 Gene3D - 151 248 IPR043132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2072 Amo-Chr18 53026947 53030612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2072 248 280 Primary Pumps ATPases AT3G21180 90.909 5.11e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2072 K18482 - ahf:112756342 452.981