Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2065 ATGAATTTTGCCACCATGTGCCGCATGAAACGCTCTAGGAGGATGACAACCACTATCGTCAGCTCTCACGTATTAGGAACAATATTGTTAATTTCCTCACCAACCCTCATTCTCCGCTGCCGGCATCACGGTTGCGCCGCCGTCACTCCGTTTGCTCGCGCCGCCTGTCGCTCATTCTCAGCTGACGTGGATGCAAAGATAGCGCAAGCTGGAGTACCAAAGAAGAGGACGTTCAAGAAGTTCAGTTTCAGAGGCGTGGATCTCGATGCACTCTTGACATGTGCACCAATGAACTCGTTTCAGCGCGGTTTGACTCGCAAGCCTATGGCGCTCATCAAGAAGCTGCGTAAGGCAATTCTTTGCTATTTTCATTCCAAGTACAAGTCAAAGATATCTATCACCTATACTGAAATTGGCACATCTTGCAAAATCCCTTATGGCCATGGATCCATTTATAGATTCTTCAGCCAAGATGTTGTAAAAGTTAGGGATATCATCATCAAAGACCAATTATTCGCTGAAAGTACAAAGGAAGGATCATTGGCCCTTTTAGCTTTGCATGATGATGGGATACTTGGACTTGAATTCGAAGATATTTCAATTGGGGAAGTCACACCAGTGTGGTACAATATAATAGATCAAGGGTACATATATCAAAATGTTTTCTCTCTTTGTCTAAATAAAGATCCAATGGCAGAGATAGAGGGTGAGATTGTCATTGGTGGTATTAACTCAAGACACTTTAGAGGTGAACACACTTATGTTCTAATATCTCAAAAGGGTTATTGGCAGATTGATGTTGGAGATGTTCTACTTGCAAATAGATCAACAGGTTCTCTTACATTTCTATGA 852 0.4249 MNFATMCRMKRSRRMTTTIVSSHVLGTILLISSPTLILRCRHHGCAAVTPFARAACRSFSADVDAKIAQAGVPKKRTFKKFSFRGVDLDALLTCAPMNSFQRGLTRKPMALIKKLRKAILCYFHSKYKSKISITYTEIGTSCKIPYGHGSIYRFFSQDVVKVRDIIIKDQLFAESTKEGSLALLALHDDGILGLEFEDISIGEVTPVWYNIIDQGYIYQNVFSLCLNKDPMAEIEGEIVIGGINSRHFRGEHTYVLISQKGYWQIDVGDVLLANRSTGSLTFL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2065 283 Gene3D Acid Proteases 164 282 IPR021109 -
Amo18g2065 283 Gene3D 30s Ribosomal Protein S19; Chain A 67 149 IPR023575 GO:0003735|GO:0005840|GO:0006412
Amo18g2065 283 SUPERFAMILY Acid proteases 118 277 IPR021109 -
Amo18g2065 283 ProSiteProfiles Peptidase family A1 domain profile. 64 283 IPR033121 -
Amo18g2065 283 Pfam Eukaryotic aspartyl protease 117 277 IPR033121 -
Amo18g2065 283 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 114 278 - -
Amo18g2065 283 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 114 278 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2065 Amo-Chr18 51909935 51913986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g2065 64 118 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 62.121 4.36e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2065 K08245 - gmx:100782139 234.187