Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g2037 CTTCGTCTATCTCCATCTCCATCACCGTCTATCCCATCCTTGGCCTCCGTGACCCCGATTTTAACGCCCTCTGTTTCTGCTTCCAACACTAGCATCATCTCATGGAATTTATGCATATTTCATTTGATCTATGCCTTGGATTATGTTTTTTGTAATTTCATCATAAGCATGAACATCGATGACAATAAATTTTTAGAGGAGTCTATTGAATGTGATGAGTTATGTTTTGGGTATGATAGTAGTTCTGATAAAGAAGAGGAAGATATTATCAACAATGAGGGTAAAATTAGTGAATCCATAGAGGTGTCAAATTATAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTAAACGAATTAAGTTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTCTATAGAAATTATGCTAGAGTGTATGGTTTTGTTGCGAGGCTTGACGAAAAAGTACAAGATTTCAATGGAAACATTAATATACGACATATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAATAGAAAAAAGGATCATAAGCCAATCACACGTGTAATGTGTCAAGTAAAGATTAGATTTCACTATTACTTGGTTTTACAAAAGTGGTGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTTGTTCCGGCATATCGAACAATGACCGACGCTGATAAAGCACAGGCTGAT 750 0.3667 LRLSPSPSPSIPSLASVTPILTPSVSASNTSIISWNLCIFHLIYALDYVFCNFIISMNIDDNKFLEESIECDELCFGYDSSSDKEEEDIINNEGKISESIEVSNYSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYARVYGFVARLDEKVQDFNGNINIRHMVCNREGTRRKKYLEMENRKKDHKPITRVMCQVKIRFHYYLVLQKWWVTKFEETHNHDLIPPKYIQFVPAYRTMTDADKAQAD 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g2037 250 Pfam FAR1 DNA-binding domain 137 227 IPR004330 -
Amo18g2037 250 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 82 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g2037 Amo-Chr18 49828279 49830599 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g2037 FAR1 9.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g2037 - - aip:107607226 374.4