Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1947 ATGCTTGGCAAGCGCAATTTGAGAATTTTGCAGCAGGACGAGCTGCCCGTGCACAGTAACAAAGAATCGCAAAGCAAGAAGCGAACACAAATAAAGACAAAACCAACCCTAAAGGAAGGGTTTGCATTTGCTCACTGCACTTGTAAGGCACCTTATCATTTGCGTGTTCATGATGCTGCTGTCATTGCTTCGATGGCATATTTGGTTTATCTAATAGATGGTTACCAGCAGTACTGGCTTCGTCTTGTTTGGGGTTTTGATAGTGAGCCAAGCTTTTGCTACATATTTGGATGCTTCATTACTTGTTATGATCGAAGAGTTCGCAACGATTTGGCACAGCTTTGTCGAGAAATCTGTCTTTGTTGCTGTCATCCTGGGTAG 381 0.4331 MLGKRNLRILQQDELPVHSNKESQSKKRTQIKTKPTLKEGFAFAHCTCKAPYHLRVHDAAVIASMAYLVYLIDGYQQYWLRLVWGFDSEPSFCYIFGCFITCYDRRVRNDLAQLCREICLCCCHPG* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1947 126 PANTHER - 21 58 - -
Amo18g1947 126 PANTHER - 61 126 - -
Amo18g1947 126 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 61 126 - -
Amo18g1947 126 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 21 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1947 Amo-Chr18 45952537 45953751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1947 36 126 C3H Transcription Factor Family AT2G22120 53.077 1.79e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1947 - - gmx:100791777 153.68