Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1940 ATGTGTGTGAAAGGGGAAACTAAAATTGGGAAGAAGCTTGAGAAATCACGCGTCTCAGAAGAAGAGCTGATTAAGAAAATTGAAGGGTTACTAAGATGTGGTAAGAGTTGCAGATCTCAAAAGAGGAAATATCTCTATGAAGAGGAAGCCATCATCACTAAGTTGCATGCTTCTTTTGGCAACAGTCACAAAGGTGGCTGTGGGAAACATGCTCATTTAGCCATGGCCATGGTGCAGCTCTTATATGGTGGATACCATGTCATCACAAAAGTGGCCCTCAATGTTGGTGTCAACGAATTAGTCTTCTGTGTGTTTAGGGATCTCGTTGCCCTTTCTATCCTTGCTCCTTCACAATCTTCTGTTGAATTGGGTACCTCGTCAGGGGCCATGATGCCTTTTGGAGGTCTGAACAATATGAGACAACCTGATAATAATAACTCTTCAGGGTCCCCTTCTGCTGGAAAATCTCTAGAAGCTACGTCATTCTCCAAGGGAACTGAGAGTGCAATAATGACTGGGGACAAAGGAATTCTTTCTGAAGAAAGGAAACATCTCCTAGCTGTCAAAAAAGTAGAGCTTGAAAAGCAAATTCAAGAAAGAGCTGGTGCACAAGCTTCGTCAACTACTTCTTTTCAGCAGCAAGATTCCTCTAGTACAAAGGGTGATGTTGACAGTGTATGGAGACCATCAGTCTTGGGGACAAACATCACTCTTGGGGACAAAAGAATTGGTATCAAAACTAGTGTTCTGGAAGAAAAGGCCACAGCCTGTAACATGCTTTGCTGTTATGCTGATGAGTTGAAGGAAGGATTCTTTCCATGGATTGATCAGGTTGCAGGAACTTTAGTTCCACTTCTTAAATTTTACTTCCATGAGGAGCTTAGAAAAGCAGCCGTTTCAGCAATGCCGGAGCTATTACGTTCTGCAAAGTTGGCTATTGAGAAAGGGCAATCTCAAGGTCGGGATGCATCCTATTTGAAGTTTTTGAGTGACAGTATCATCCCAGTTTTGGTGGACGCTTTACATAAGGTATTCCGTATACAAGTTTATCTGTTCTTAGATGCATCTATATGGAATTCATTAGGTTTTTACAGCATGAGAACTGAACTAGCTGAAAGAATGTGTTATGGGAATATCTATGAACTTGGTCACATTCTTGGTTGGAATTTTGAATCTTCCATCAGCTAA 1188 0.415 MCVKGETKIGKKLEKSRVSEEELIKKIEGLLRCGKSCRSQKRKYLYEEEAIITKLHASFGNSHKGGCGKHAHLAMAMVQLLYGGYHVITKVALNVGVNELVFCVFRDLVALSILAPSQSSVELGTSSGAMMPFGGLNNMRQPDNNNSSGSPSAGKSLEATSFSKGTESAIMTGDKGILSEERKHLLAVKKVELEKQIQERAGAQASSTTSFQQQDSSSTKGDVDSVWRPSVLGTNITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAGTLVPLLKFYFHEELRKAAVSAMPELLRSAKLAIEKGQSQGRDASYLKFLSDSIIPVLVDALHKVFRIQVYLFLDASIWNSLGFYSMRTELAERMCYGNIYELGHILGWNFESSIS* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1940 395 MobiDBLite consensus disorder prediction 132 159 - -
Amo18g1940 395 Gene3D - 229 372 IPR011989 -
Amo18g1940 395 PANTHER OS03G0701000 PROTEIN 215 364 - -
Amo18g1940 395 MobiDBLite consensus disorder prediction 200 224 - -
Amo18g1940 395 MobiDBLite consensus disorder prediction 138 159 - -
Amo18g1940 395 SUPERFAMILY ARM repeat 247 307 IPR016024 -
Amo18g1940 395 PANTHER IMPORTIN BETA 215 364 IPR040122 GO:0006606
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1940 Amo-Chr18 45651160 45655226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1940 71 116 Nodulin-like Gene Family AT3G45870 84.783 2.03e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1940 K20222 - ahf:112771084 438.728