Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1932 ATGTCACTAATAATCACTGCCCTTTTCTTTACGTGCATTATTGTCATTATTGTCACCAAATTTCTTCGCACATTATCACTTCATGCAAACACCACAAAACAAAACTTCAAGAACCTTCCACCGGGACCTTCCTTTCTTACCATGATGCAAAACCTTGTTGAGTTTTGCAATAAGCCACAACAAACACTAGCCAAGCTTGCTAAGCTTCATGCCCCAGACATAATGCTTCTAAAGCTTGTTCAATCATCAACTACAATAATCATATCTTCCCCAAACATTGCCAAAGAAGTGCTACAAACCAATGATCTGTTGTTCTCAGATCGAACAGTTCCAACTATTGTAACCGCTCTCGATCACCACAACTATAGCTTGCCCTTCTTACCGGTTTGTCCACTTTGGAAAGATCTAAGAAAAATATGCAATGAACAATTGTTCTCCACCAAGGTCCTCGACACGAGTCAAGGCCTTAGGCGCAAGAAGCTTCTAGATCTTCTTAACGATATGCAAAATTACGGCCGAGCCGGAGAAGCTGTTGATGTTGGGAGAGCAGCTTTTAGGGCATGTATAAATTTTTTGTCCTATACTTTTGTGTCTGAGGATTTTGTTGAATCTGTGGAGAATGATAAAGATGAGTACAAAGATATTGTTTCTACTCTCTTGAAATTATCAGGAACAGCAAATGTGGTTGATGTTTTTCCGGTGTTGAAGGTGTTTGATCCACAAGGACTTCAAAGGAACACTGCTAATTACATTACAATGTTTTTTCATAGACTAGACAAGTTGATTGATAAACGGTTGAAGCTAAGAGAAGAGGGGGATAATTATGTCACAAACAATGACATGCTGGACACGCTTCTTGATATTTCTCATCAGGATAGTGAGAAGATGGATAGAGAAAAAATCAAACATTTTTTACTTGATCTACTTGTTGCGGGAACAGACACCACTGCATATGGATTAGAAAGAGCAATGACTGAATTACTTCATAACCCAAAGGTCATGTCAAAAGCCAAACAAGAATTAGAACAAATCATTGGAAAAGGTAACCCCATCGAGGAATCCGATGTTGCTAAACTGCCATACTTACAAGCCATAATAAAAGAGACACTAAGATTGCATCCACCAGCTCCACTTTTGCTCCCAAGAAAAGCAAAAGTTGATGTTGAAATCTCAGGTTACACAATCCCAAAGGGTGCAAGAGTTCTAATAAATGCATGGGCTATTGGTAGAAACCCTAATATATGGGAAGATGCAAATTTGTTTTTGCCCGAGAGGTTTTTGGGGTCTAATATTGATGTTAAAGGAAGAGATTTTCAGCTCACACCATTCGGTAGTGGGAGAAGAATTTGTCCCGGTTCACCACTTGCTATTAGAATGATGCATGTGATGTTGGGATCATTGGTCAATTCTTTTGATTGGAAACTTGAAAATAATATCAAGCATGAGGATATGGACATGGATCAACCCCTCCGAGCTATTCCAGTTGCACTGAATAATTAA 1500 0.3893 MSLIITALFFTCIIVIIVTKFLRTLSLHANTTKQNFKNLPPGPSFLTMMQNLVEFCNKPQQTLAKLAKLHAPDIMLLKLVQSSTTIIISSPNIAKEVLQTNDLLFSDRTVPTIVTALDHHNYSLPFLPVCPLWKDLRKICNEQLFSTKVLDTSQGLRRKKLLDLLNDMQNYGRAGEAVDVGRAAFRACINFLSYTFVSEDFVESVENDKDEYKDIVSTLLKLSGTANVVDVFPVLKVFDPQGLQRNTANYITMFFHRLDKLIDKRLKLREEGDNYVTNNDMLDTLLDISHQDSEKMDREKIKHFLLDLLVAGTDTTAYGLERAMTELLHNPKVMSKAKQELEQIIGKGNPIEESDVAKLPYLQAIIKETLRLHPPAPLLLPRKAKVDVEISGYTIPKGARVLINAWAIGRNPNIWEDANLFLPERFLGSNIDVKGRDFQLTPFGSGRRICPGSPLAIRMMHVMLGSLVNSFDWKLENNIKHEDMDMDQPLRAIPVALNN* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1932 499 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Amo18g1932 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 497 - -
Amo18g1932 499 SUPERFAMILY Cytochrome P450 40 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 6 497 - -
Amo18g1932 499 Pfam Cytochrome P450 40 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1932 499 Gene3D Cytochrome P450 29 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1932 Amo-Chr18 44944810 44946705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1932 4 488 Cytochrome P450 AT2G45550 39.264 1.01e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1932 - - aip:107612182 962.214