Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1927 ATGGAATCAGCATTACCACACTACTGGTGGAATGTTGAAATGAAGAACTCAACATTCTTTAGTGCACTCGAACAAATTAAAACTACTACTACGGATTCACCAAACAATGTCCAAAATCATAGCCTCATATTTAACTTTTCATACCTTTCCCTTTCACTAATAACCCTCTTATTCACATGCATTTTCGCCCACTTTCTTCATGCACGAAACACAAAACCAAAGCTTCCACTTCCACCAGGACCATCCCTTTTTATCATGTTAACAAACCTCTTTGAATTTATAAGAAAGCCACAACAAACATTGGCCAAGATTGCTAAGCTTTATGCCCCAGACATAATGCTTTTGAGGCTTGGCCAATCAACCACTGTAATAATCTCTTCACCAAACATTGCCAAAGAAGTTCTCCAAACCAATGATTTGTTGTTCTCCGATCGAACGGTTCCGAGTATTGTGACTTCCCTAGATCACCATAACTATAGCTTGCCATTTCTTCCTGTCTGTCCTCTTTGGAGAGACTTCAGGAGAATATGCAACGATCAATTATTCGCCAATAAGACCCTTGATGCGAGTCAAGGTCTTAGGCGTAAGAAGCTTCAAGATCTTCTTAACGATATGCAAAAATACGGCCGGACTGGGAAAGCCGTTGATGTAGGGCATGCGGCTTTTAGGGCATGCATAAATTTCTTGTCCTATACTTTTGTGTCCGAGGATTTTGTTGAATCTGTAGAGAATGGAGAGTACAAGGACATTGTGTCCACTCTCTTGAAACTAACAGGATCAACTAACGTGGTTGATATTTTTCCATTTTTAAAGATTTTTGATCCTCAAGGTCTTCATAGACACACTATTAATTACCTTACCAAGTTCTTCCACAGCTTGGACAAGTTAATTGACAAAAGGTTGAAGCTAAGAGAAGAACCGCATTATGTCACAAATAATGATATGTTGGACACACTACTTGACATTTCTCAAGAAGATAGCCAAAAAATGGACAGGAGAAAGATCAGACACTTTTTACTTGACCTACTTGTTGCAGGAACAGATACAACAGCATATGGATTAGAAAGAACAATGACAGAAGTACTCCACAATCCAGAAGTTATGTTCAAAGCCAAACAAGAGTTAGAACAAAACATTGGACGTGGTAACCCTCTTGATGAATCAGATATTGCAAAACTGCCATACTTACAAGCAATTGTAAAAGAGAGTTTACGGTTACACCCTCCAGCTCCACTCTTGCTCCCAAGAAAAGCTAAGGTAGATGTGGAAATCTCAGGTTATAGGATCCCAAAAGATGCAAGGGTTCTAATTAATGAATGGGCTATTGGTAGGAACCCTAACGTGTGGGACAATGCCAATTCGTTTCTGCCAGAGAGGTTCTTGGATTCAAAAATTGATGTTAAAGGAAGAGATTTTCAGCTGACACCATTTGGAAGTGGAAGAAGAATTTGTCCTGGCTCACCATTAGCCATGAGAATGATTCATGTCATGTTCGGATCTTTGATCAATTCTTTTGATTGGAAAATTGAAAACATGGACAAAGATCTACCACTGAGAGCTATTCCTATCATAATCAACAACTAA 1584 0.3902 MESALPHYWWNVEMKNSTFFSALEQIKTTTTDSPNNVQNHSLIFNFSYLSLSLITLLFTCIFAHFLHARNTKPKLPLPPGPSLFIMLTNLFEFIRKPQQTLAKIAKLYAPDIMLLRLGQSTTVIISSPNIAKEVLQTNDLLFSDRTVPSIVTSLDHHNYSLPFLPVCPLWRDFRRICNDQLFANKTLDASQGLRRKKLQDLLNDMQKYGRTGKAVDVGHAAFRACINFLSYTFVSEDFVESVENGEYKDIVSTLLKLTGSTNVVDIFPFLKIFDPQGLHRHTINYLTKFFHSLDKLIDKRLKLREEPHYVTNNDMLDTLLDISQEDSQKMDRRKIRHFLLDLLVAGTDTTAYGLERTMTEVLHNPEVMFKAKQELEQNIGRGNPLDESDIAKLPYLQAIVKESLRLHPPAPLLLPRKAKVDVEISGYRIPKDARVLINEWAIGRNPNVWDNANSFLPERFLDSKIDVKGRDFQLTPFGSGRRICPGSPLAMRMIHVMFGSLINSFDWKIENMDKDLPLRAIPIIINN* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1927 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 477 486 IPR017972 GO:0005506|GO:0016705
Amo18g1927 527 PANTHER CYTOCHROME P450 FAMILY PROTEIN 52 525 - -
Amo18g1927 527 Pfam Cytochrome P450 78 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 52 525 - -
Amo18g1927 527 SUPERFAMILY Cytochrome P450 73 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS P450 superfamily signature 475 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS P450 superfamily signature 484 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 Gene3D Cytochrome P450 67 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 130 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 334 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 397 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 474 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo18g1927 527 PRINTS E-class P450 group I signature 484 507 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1927 Amo-Chr18 44368467 44372130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1927 56 511 Cytochrome P450 AT2G45550 39.316 4.87e-121 363