Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1900 ATGGGTCGCAGTGTAGATGAGGAAGAAAATAAATGTGACTTGAAGGACCTTACCGGGGAGGGAAATATTGAGAGCATGCTTTTTTTCAAGCAAGGGTTACGGGAATTAGCTTCACTAAAGGCATCCCCAGTATTCATCTTTGCAAACCAAGCCGAACTTGACATGCTCGAAACTACTCTTGTCGCCCTTCAAGACATTATGCTCAACAAAGTTCTTGATGAATCTGGCAAGAAGATTCTTTGCTCTGAGTTCTCCAAGATTATGCAACAGCTATGTTCATCGAGTGGGTCATATAGCAAGAGCTGGCCGAGAAGGATGTGCCATCACATTTGTGACTGA 339 0.4366 MGRSVDEEENKCDLKDLTGEGNIESMLFFKQGLRELASLKASPVFIFANQAELDMLETTLVALQDIMLNKVLDESGKKILCSEFSKIMQQLCSSSGSYSKSWPRRMCHHICD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1900 112 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 37 94 IPR044830 GO:0003700
Amo18g1900 112 PANTHER BNACNNG38170D PROTEIN 37 94 - -
Amo18g1900 112 Pfam MEKHLA domain 38 90 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1900 Amo-Chr18 42932180 42933263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1900 38 90 Homeobox Transcription Factor Family AT1G30490 80.000 4.59e-22 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1900 K09338 - ahf:112770971 218.009