Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1870 ATGCAGACCAGCTGTGTTGTAGATGAAAAATTTGTCCCAAAGGTAGGAATGATTTTCAAGACACTAGAAGAAGCTGGAAAATTCTACAAACAATATTCCAAACTTGCCAGTTTTTCTACCAAAATAAGGAACACGACTCAGAACGGAGACAAGATTAAGAATAAACTAATTGTATGCTCTAGAGAAAGGAGGTGGAAATCAAAGATATATCCAACTTTGAAGACAAATCCTTCAGCTGGGTTAAATTGTCCAGCCAGAATTTACGTACATATAATGAAGGATGTTGGTCTTTGGACAATTTTCAAAGTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCAGGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATAGCTGTACGAGGATCGCCATATATGGATTTCGGTTTACTTGGATCACCACTTTTGTGCCGGGATGAGAAGCACATAAAGGAGCGAGAGTATGCATTTATTTTTCAACAAAGATCAAGCAGAGAGAGAATTCGATGCTGCAGATTTTCACACCGTGATACCGTGTGCAACAAAATCAGCAATAAAGGCACAGTTTCAACATGTATATACCCATGA 594 0.3906 MQTSCVVDEKFVPKVGMIFKTLEEAGKFYKQYSKLASFSTKIRNTTQNGDKIKNKLIVCSRERRWKSKIYPTLKTNPSAGLNCPARIYVHIMKDVGLWTIFKVVLNHSHPCCPDQAEMLKQHRELSIAVRGSPYMDFGLLGSPLLCRDEKHIKEREYAFIFQQRSSRERIRCCRFSHRDTVCNKISNKGTVSTCIYP* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1870 197 PANTHER OS03G0843700 PROTEIN 9 145 - -
Amo18g1870 197 Pfam FAR1 DNA-binding domain 27 112 IPR004330 -
Amo18g1870 197 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 145 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1870 Amo-Chr18 42140455 42142059 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1870 FAR1 8.6e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1870 - - aip:107636690 234.187