Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1858 ATGCTGGTTTATGAGTTTGTTCCAAATGGAACCTTGAAGGATACTATCACAGGGAAATCAGGTATCAGATTTGGGTGGCATAGAAGGATAAAAGTAGCCCTTGGAGCTGCAAGGGGTTTCGCTTATCTTCACGAACACGCCGATCCTCCAATCATACACACGGACATCAAATCAAACAACATTTTGCTGGATGAGAAGCTTGATGCAAAAGTTGCTGAGTTTGGCCTATCCAAACCAATATTAGATTATGGGAAAGATCATGTCACCACTCAAGTTAAAGGAACAATGGGATACTTGGATCCGGAATACTACATAAGTCAGCAGTTGACTGAGAAGAGTGATCTGATAACCAGAAGAAAGCCGATAGAACGAGGGAAATACATTGTGAAAGTGGTCAGGAATTCAATTGACAAGACTAAGGACATGTATGGCCTGCATGAACTCATCGACCGAGCCATCAGAGATGGCTTGGCCCTGAATGGTTTCGACAAGTTTGTTGATCTTGCAATGATGTGCCTTGAAGAATCAGGAGCTGAGAGGCCTCCAATGAGTGATGTAGTGAAAGAGATTGAAATCATATTGCACTCAATTGGTTTGGACCCTGCTGCTGAATCTGAACCATCAACTTCATCAATTTCCATCAACCTTATAGCAGTGGATCCTTGTATTCAAGCTCGGAATATATACAAAAAAAAAACAATGAGCATGAGCCTAGATAAGTCTTCTAAGATCCAGGGTAAGAGAAAAGTAGAAAAATCTTTGGATAATGAGTTTGTAAATGTTAGCTAA 789 0.4081 MLVYEFVPNGTLKDTITGKSGIRFGWHRRIKVALGAARGFAYLHEHADPPIIHTDIKSNNILLDEKLDAKVAEFGLSKPILDYGKDHVTTQVKGTMGYLDPEYYISQQLTEKSDLITRRKPIERGKYIVKVVRNSIDKTKDMYGLHELIDRAIRDGLALNGFDKFVDLAMMCLEESGAERPPMSDVVKEIEIILHSIGLDPAAESEPSTSSISINLIAVDPCIQARNIYKKKTMSMSLDKSSKIQGKRKVEKSLDNEFVNVS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1858 262 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1858 262 SMART serkin_6 2 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1858 262 SUPERFAMILY Protein kinase-like (PK-like) 1 215 IPR011009 -
Amo18g1858 262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Amo18g1858 262 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 210 - -
Amo18g1858 262 Gene3D Transferase(Phosphotransferase) domain 1 7 205 - -
Amo18g1858 262 Pfam Protein kinase domain 2 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1858 262 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1858 Amo-Chr18 41770232 41771931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1858 1 209 Receptor kinase-like Gene Family AT5G49760 59.091 4.08e-83 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Amo18g1858 Pkinase 3.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1858 - - aip:107638778 394.43