Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1831 ATGATCTCAGCATTACAACACCCTTGTCTTGTTAAACTTTATGGATGCTGTGTTGAGGGAGATCAATTATTTGGATATATGGCACCCGAATATGCAATGAATGGTTATTTGACTGATAAAGCAGATGTTTATAGTTTTGGAATTGTTGTCTTGGAACTTATTAGTGGAAAGGCTAATACCATTCATCGATCAAAGGAGGAAGTGTTATATCTTCTTGATTGGGCACATTTGTTGAAAGAGAAAGGCATGCTCATGGAGCTAGTTGATCGAAGGTTAGGTTCAGATTTCAATGAAGAGGAAGTAATGGTGATGATCCAAGTTGCTCTCTTATGCACCAATGCGACTGCAAATCTTAGGCCTTCCATGTCTTCAGTTCTAAGCATGCTTGAAGGCAAAACCATTGTTCCAGAATTTGTTTCAGATCAAAGTGAATTAATGGATGAGATGAAGTTAGAGGCAATGCGACAATATTACTATCAAAAGGAAGAAAATAAAATAAATGAGGCCAACAATAATGTGTCACATAATGTTGTTGAAGAACAATGGATTGCTTCATCTTCGTCTGACCTCTATCCTATGCACATTGATTCTTCATCATATTATTGGGAGCAAAGAAACTAG 621 0.3688 MISALQHPCLVKLYGCCVEGDQLFGYMAPEYAMNGYLTDKADVYSFGIVVLELISGKANTIHRSKEEVLYLLDWAHLLKEKGMLMELVDRRLGSDFNEEEVMVMIQVALLCTNATANLRPSMSSVLSMLEGKTIVPEFVSDQSELMDEMKLEAMRQYYYQKEENKINEANNNVSHNVVEEQWIASSSSDLYPMHIDSSSYYWEQRN* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1831 206 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 22 - -
Amo18g1831 206 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 24 166 - -
Amo18g1831 206 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 22 - -
Amo18g1831 206 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 166 - -
Amo18g1831 206 Pfam Protein tyrosine and serine/threonine kinase 25 128 IPR001245 GO:0004672|GO:0006468
Amo18g1831 206 SUPERFAMILY Protein kinase-like (PK-like) 25 138 IPR011009 -
Amo18g1831 206 Gene3D Transferase(Phosphotransferase) domain 1 18 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1831 Amo-Chr18 41053998 41055295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1831 1 38 Receptor kinase-like Gene Family AT1G07650 65.789 3.50e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1831 PK_Tyr_Ser-Thr 5.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1831 - - gmx:100305430 274.248