Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1820 CAACTTGAACTGGACTCTCTCAATTGCCACAGACCCAATGCTCACCGTGGCAAAATCGAACGATCTGCACTTCCAAATTGCGCGCTTCTATCAACGAGGTGTAAGCTTAACCAGTTTGCTGATCGTCTTTTCTCCCCTTCTCAGTGCCATCTTCAATTGATAAGTTCGAATGGGATTAGTAAATTCAGCATTGAGTCGCCGAAGAAGGTTCTAAAATCGCGGAATCAAGATTTTATAGGCAATCCTGAATCACAAAGAAGACTGGAAGGAACCCTAAGCAGTTCCATTGCGCCTCTCTCATCGTCACCCTGTTTAGAGCTAATGGAAATTTATGTGGATAATGAGGCCAAGTTAACACTTCATGGTCTTGTTCAAGTAGTTGAAGAGTTGAACAAGTTGCTTGTGGAGTACAACTTCCCTTCAATACACAGTGCTGGAGGTCTTGTTGTTACTGTTAGAATTCTGCCAAAGTTGGATAAAGTGACACTTCTTCAGATAGATTTTAAATTACCAATTGACATTTTGAAAAATGTTATGCAACTGGCAACTGAAGGCTGCAAAGCAGTTGCAAATTACATCCGAGAAATTTTATTGAAGCACACAAAGTAA 609 0.4072 QLELDSLNCHRPNAHRGKIERSALPNCALLSTRCKLNQFADRLFSPSQCHLQLISSNGISKFSIESPKKVLKSRNQDFIGNPESQRRLEGTLSSSIAPLSSSPCLELMEIYVDNEAKLTLHGLVQVVEELNKLLVEYNFPSIHSAGGLVVTVRILPKLDKVTLLQIDFKLPIDILKNVMQLATEGCKAVANYIREILLKHTK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1820 202 Gene3D - 116 202 IPR027408 -
Amo18g1820 202 SUPERFAMILY Ribonuclease PH domain 2-like 144 201 IPR036345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1820 Amo-Chr18 40352581 40355332 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1820 88 148 Eukaryotic Initiation Factors Gene Family AT5G11170 40.000 4.63e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1820 K11600 - oeu:111411700 94.3597