Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1818 ATGCCTAGAAATGACATTTTCTATGATTTTCCCGGCTTAGTGGATCCACCACCTCCAGCATCTAATGAAGAGCCATCCCCTAAGAAAACTGATACAACTTTGTTCTTCCTTGGAGGGATAGTGATGTTCATCGTATTGTTGATAATTTTGGTTGTATTTTGGAAGCGTATCAAAGGGAGCAAAAATACAACACCTCCTAAAACTACTAAAGGCAAACAAGGGAAACTTACTGAAACAGCAGAAGTTATGGATATGATGTTTTCATCTAAACAACAGCAAGGATCCATGGAGTTGTTGAGTGGGAACCTTAGGACAATTAGTTACTTTGACTACCAGATATTAAGAAGAGCAACCAAGAATTTTTCTCCTACTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATCGGCAGGGAGAAAGAGAGTTTCTGGCAGAGGTGAGGTTGATCACAAGTATCCAACACAAAAATCTCGTTCGCCTTCTTGGATGTTGCATAGATGGACCACAAAGGATACTTGTCTATGAATACATGAAGAACAGAAGTTTGGACTTCTTCATATATGGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGATTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGGGTTATACAGCACCTGAATACGCTTTAAGAGGAGAATTATCAGAAAAGGCGGATATCTATAGTTTTGGAGTTCTGTTGCTCGAAATTATTTGTTGTAGAAAAAACACAGATCTCACTTTGTCATTGGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAACTCAAAGATTATGGAGCTTGTAGATCCAAAGCTGAAAGAAGAGGGGTTCGTGGAGAAAGATGTTATGCAAGCATTCCACGTGGCATTCCTCTGCCTCCAGCCACTTGCAAATCTAAGACCTCCGATGTCAGAGATCGTGGCACTCTTGACATTCAAAATTGACATGGTCACAACACCAATGAGGCCTGCGTTTCTTGATCGAAGGCGCAAAACTGATTTTCAAACCCCTTCCCCAGAAGTAATATCCATGCTTTCACATCTCCCATGA 1239 0.4132 MPRNDIFYDFPGLVDPPPPASNEEPSPKKTDTTLFFLGGIVMFIVLLIILVVFWKRIKGSKNTTPPKTTKGKQGKLTETAEVMDMMFSSKQQQGSMELLSGNLRTISYFDYQILRRATKNFSPTNLLGSGGFGPVYRQGEREFLAEVRLITSIQHKNLVRLLGCCIDGPQRILVYEYMKNRSLDFFIYGNNADRFLNWSTRFQIVLGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFHPKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYALRGELSEKADIYSFGVLLLEIICCRKNTDLTLSLEMQYLPEYAWKLYENSKIMELVDPKLKEEGFVEKDVMQAFHVAFLCLQPLANLRPPMSEIVALLTFKIDMVTTPMRPAFLDRRRKTDFQTPSPEVISMLSHLP* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1818 412 Gene3D Phosphorylase Kinase; domain 1 90 138 - -
Amo18g1818 412 SMART serkin_6 121 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1818 412 Pfam Protein tyrosine and serine/threonine kinase 139 372 IPR001245 GO:0004672|GO:0006468
Amo18g1818 412 PANTHER RECEPTOR-LIKE KINASE 100 391 - -
Amo18g1818 412 Gene3D Phosphorylase Kinase; domain 1 139 178 - -
Amo18g1818 412 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 391 - -
Amo18g1818 412 ProSiteProfiles Protein kinase domain profile. 121 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1818 412 Gene3D Transferase(Phosphotransferase) domain 1 179 381 - -
Amo18g1818 412 SUPERFAMILY Protein kinase-like (PK-like) 100 376 IPR011009 -
Amo18g1818 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1818 Amo-Chr18 40254223 40256659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1818 97 389 Receptor kinase-like Gene Family AT1G56120 44.872 4.26e-89 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1818 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1818 - - adu:107478947 745.732