Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1810 ATGCTAGGACTTATCAATATTCAGCTCAATTATTTTGACTCGGGGAGTTTATCGACATCATCATTGATCTCTTATTTGGACAAAAGGTATAGGAGAGGAGAGGAGTCCTCAGATACGAGCTGTTCTACTGAGAGCAACCAATGCACTTACACATTTTACATTTTTGAGGGATCCTTGACAAAAAATTCTTCGACGCCTATAGTTTTCGGTTGTAGTAAGTTACAGACTGGAAAATTGAGTAAATATGATAGAGTGATCAATGGAATATTTGGATTTGGGCAGCAGGAACTATATGTCATCTTTCTGCTCTCTTCGCAAAGAATAGCCTCGACAGTGTTCTCACATTGTCTGAAGGGTGATTACAGTGAGAGTTGGAAGACAATGGACATTGCTCTGAAAGAACATGCATATGACACATGTAAACAAAATACTCTAAATCGGTCAAAGCAACTTTATACACATACTAGGGGTTCGAAGACATTGGCAAGGCAAAAGGATGAAGAGAAGGAGATTACAGAATTGAAGGTAATGGTAGCAGAACTAAAGGCAGAGGCAGCAGAAGAGAAGGCAAAGAGACAGACCATGGAGAATCTGTTGAGATACATAATCCAACATGGTGAGAGTGGAGCAGGGAAGACTAAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGAAAGACTTGCAAAGGGATATGGGTGAGGGTGCTTTAGCATATGTAAAAAGCATCGAGATTATGTTCAAGAATCGGGCGACACTGGCTGATAAATAA 795 0.4075 MLGLINIQLNYFDSGSLSTSSLISYLDKRYRRGEESSDTSCSTESNQCTYTFYIFEGSLTKNSSTPIVFGCSKLQTGKLSKYDRVINGIFGFGQQELYVIFLLSSQRIASTVFSHCLKGDYSESWKTMDIALKEHAYDTCKQNTLNRSKQLYTHTRGSKTLARQKDEEKEITELKVMVAELKAEAAEEKAKRQTMENLLRYIIQHGESGAGKTKTAKIAMQYLAALGGGSGIEKDLQRDMGEGALAYVKSIEIMFKNRATLADK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1810 264 Coils Coil 164 198 - -
Amo18g1810 264 Gene3D Acid Proteases 13 127 IPR021109 -
Amo18g1810 264 Gene3D Kinesin motor domain 167 254 IPR036961 -
Amo18g1810 264 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 59 - -
Amo18g1810 264 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 54 122 - -
Amo18g1810 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 232 IPR027417 -
Amo18g1810 264 PANTHER ASPARTYL PROTEASES 7 59 IPR001461 GO:0004190|GO:0006508
Amo18g1810 264 PANTHER ASPARTYL PROTEASES 54 122 IPR001461 GO:0004190|GO:0006508
Amo18g1810 264 SUPERFAMILY Acid proteases 6 120 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1810 Amo-Chr18 39806190 39816978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1810 202 236 Myosins gene family AT1G50360 82.857 1.11e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1810 - K00924 adu:107459474 172.94