Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1805 ATGGCAAAAGAGCGCTTTGGCTTGGAGACTTGTGTTGCGTACCTCAACCCCGCAGTCCCATCGCGTGTGGAAGTCCGGCGCCGTCGCAGGAGCGTGAGGTCGTCTCCTCTGTTCAAGCGCGCTCTCATTGTGTTCACCGTGCCTCTGTCACCGCCACCGTGCCCCTGTCACCGTCTCGTCTGTTCGTGCTTCCCCCGCCGGCGTGAGGAAACATCACTGGACATTGGCATGGACGAGGCGGCCTTTGGAACAAAATATTTAGATGGTGATGGTGACCTGGGCAATGATGTACGTGGCAGCGGTTTAGCGAGGCCAGAGGAGGTGATGGAGATGTTGTTTAACTCTTCCGACGTGGCTGCTCATTTCTACGAACAGTATAGTCGAGGCAAGGGTTTTGCTACGCGTGTTGGTAAGAAGCTAAGAAATAAGAATGGGGACATCGTGCGATATACATATTTGTGCAATAGAGAAGGGTTTAGGCAAAAGAAGTGGTTGGAGTTGCAAGGTCGAAAGAGAGAACACAAGGTGGTTATGCGATGTGGGTGCATGGCAGAGATGCGTATCAAGCAAAATGGTCAGATGGGTAAATGGTATGTGTCAAGATTTGTAGATGACCACAATCATGAGCTCCTCCCTCCGAAGTTGGTGGAATACTTGCCTCCACATAGGAAGATGTCAGATGTGGACGTAGCCCACATGGATAGCTTACGGCAAGTTGGGATTTTAGTTCCTAAAATATATGAGTCGCTTGCAGCACAGACTGGTGGCTTTGATCATATCCCATTCACAAAGAGAGATATGTACAATGAAATGAGGCGCCAACGAGGCATGAGGAAGGGAGACGTCAATGCAACGATAAGGTACTTTGAGGCAGGTGCGAAA 882 0.5023 MAKERFGLETCVAYLNPAVPSRVEVRRRRRSVRSSPLFKRALIVFTVPLSPPPCPCHRLVCSCFPRRREETSLDIGMDEAAFGTKYLDGDGDLGNDVRGSGLARPEEVMEMLFNSSDVAAHFYEQYSRGKGFATRVGKKLRNKNGDIVRYTYLCNREGFRQKKWLELQGRKREHKVVMRCGCMAEMRIKQNGQMGKWYVSRFVDDHNHELLPPKLVEYLPPHRKMSDVDVAHMDSLRQVGILVPKIYESLAAQTGGFDHIPFTKRDMYNEMRRQRGMRKGDVNATIRYFEAGAK 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1805 294 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 106 224 - -
Amo18g1805 294 Pfam FAR1 DNA-binding domain 121 212 IPR004330 -
Amo18g1805 294 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 106 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1805 Amo-Chr18 39574525 39576727 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1805 FAR1 1.9e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1805 - - adu:110274804 437.187