Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1802 ATGACGGGGGCGAGGCAGCCTACTTGGAAGGAGAGGGAGAACAACAAGCGGAGGGAGCGGCGGCGGAGGGCGATCGCCGCCAAGATCTTCGCCGGGCTGAGAATGTACGGAAACTACATGCTCCCGAAGCACTGCGACAACAACGAAGTTCTTAAGGCGCTGTGCAACGAAGCCGGTTGGACCGTTGAACCTGACGGCACCACGTATCGGAAGGGATGCAAACCTGTTGAACGCTTGGAAGTTGGTGGTTCTGCAGTGGCAACCCCATGTTCATCTTTCCATCCAAGTCCCTGTGCTTCCTATAATCCAAGCCCAGGATCTTCTTCGTTCCCTAGCCCGCGCTCATCTCCCTTTGCCACAAATGCCAATGCTGATCCAAATTCACTCATTCCATGGCTCAAGAACCTCTCATCTGGATCATCGTCAGCTACCTCTTCAAGGATTCACCAAATATTCATTCATAATGGCTCAATTAGTGCTCCTGTCACTCCTCCACTGAGCTCTCCATCTGCGCGAGCTGAATGGGAAGACCAGCCCGCCAATCCCATGGTGGGTGTACAGCAGTACTCTTTCATGCCTTCCTCCACTCCTCCAAGCCCTGGACGCCAAGTTGTTGACCAAGATTTGTTCGGCAAGATTAGGGCTCCACAGGGTGATGGGACAACTTCTCCAACCTTCAGCCTGGTCTCCTCAAACCCATTTGGCGTCAAGGAGGAGACTCTTGGTGGCAGCAGCTCCTGCAACTGGACGCCAATTCCTAGTGGTACTTGTTCTCCTGTTGTCGCCGCAAGCTCTGATCACACAACAGATATTCTGATGGCTGAAGCTGCTTCAGATGAGTTTGCCTTTGGAAGCACCAAAAAAGGTTTTGTGAATGCCTGGCAAGGAGAGAGGATCGTTATTGGGTCAGATGACCTTGAGCTCACCCTCGGGAGCTCAAAAACCAGGCAAACTTCTGCATGA 963 0.5275 MTGARQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYMLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERLEVGGSAVATPCSSFHPSPCASYNPSPGSSSFPSPRSSPFATNANADPNSLIPWLKNLSSGSSSATSSRIHQIFIHNGSISAPVTPPLSSPSARAEWEDQPANPMVGVQQYSFMPSSTPPSPGRQVVDQDLFGKIRAPQGDGTTSPTFSLVSSNPFGVKEETLGGSSSCNWTPIPSGTCSPVVAASSDHTTDILMAEAASDEFAFGSTKKGFVNAWQGERIVIGSDDLELTLGSSKTRQTSA* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1802 320 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 3 316 - -
Amo18g1802 320 MobiDBLite consensus disorder prediction 97 122 - -
Amo18g1802 320 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 137 IPR008540 -
Amo18g1802 320 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 3 316 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo18g1802 320 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1802 Amo-Chr18 39369906 39374674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1802 2 316 BZR Transcription Factor Family AT1G78700 61.862 1.71e-105 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo18g1802 BES1_N 2.8e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1802 - - cit:102626497 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1802 18 39369906 39374674 Amo18g1802 18 39369906 39374674 ECH