Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1799 ATGAAAGGTTACTTATCTACGAATTTGTTCCCGATAAAAGTCTTGACCACTTCATATTTGGTAGGCGTTGCTCGAGCTATTCTTTATCTTCATGAAGATTCTAGAATGCGTATCATACATCATGATCTTAAACCAAATAATATTCTCTTAGACGGAGAGATGAACCCTAAAATATCAGATTTTGGCTTAGCAAGATTAGTTCTCGTAAATCAAAGTCGAGAGAATACAAATAGAATTCTCGGAACATATGGATACATGGCTCTTGATTTTGGTGTATTAATTCTTCAAATTGTGAGCGGTTATAAACACCAGGGTGCCGGCAATGGAGAGAATGTGGAGGAGTTACCACTAAACTTTGCATGGAGAAACTGGAGGGAGGGGACAGCTATGAATATTGTAGATCCATCACTAGAGAACAATTCATCAGATGAAATGATGAGGTGCATCCATATTGGTTTACTCTGTGTTCAGGAAAATCCAGCTGAGAGACCAACCATGTCTTCTATTATTTCAATGCTTAAGAACTATTCTATTACTCTCCTAGTACCTTTGGAACCTGCATTTACT 567 0.3757 MKGYLSTNLFPIKVLTTSYLVGVARAILYLHEDSRMRIIHHDLKPNNILLDGEMNPKISDFGLARLVLVNQSRENTNRILGTYGYMALDFGVLILQIVSGYKHQGAGNGENVEELPLNFAWRNWREGTAMNIVDPSLENNSSDEMMRCIHIGLLCVQENPAERPTMSSIISMLKNYSITLLVPLEPAFT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1799 189 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 20 188 - -
Amo18g1799 189 Gene3D Transferase(Phosphotransferase) domain 1 11 89 - -
Amo18g1799 189 Gene3D Transferase(Phosphotransferase) domain 1 90 180 - -
Amo18g1799 189 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1799 189 Pfam Protein kinase domain 17 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1799 189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 38 50 IPR008271 GO:0004672|GO:0006468
Amo18g1799 189 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 188 - -
Amo18g1799 189 SUPERFAMILY Protein kinase-like (PK-like) 17 173 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1799 Amo-Chr18 39249784 39251338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1799 22 188 Receptor kinase-like Gene Family AT4G21410 52.432 1.05e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1799 Pkinase 2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1799 - - gmx:100791056 240.736