Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1789 ATGAGTCTAGTTAGATTGTTAATGCTAAACCTGGGATATCTCATGTTTGGTGACGAAGTTTTGCCTCAGATAACATTGAACTTGCCTACTAATGCCTTTGCTTCCAAAATTTCCCTATGGATAATATCTAAATTTTCCTTAATTTTAAACAAATGTGCTTTGACCATGAACCCGCTTGCAAGGAGTCTGGAGGAGTTGCTGCCCCATAGAATTTCAAGTACCACTTGGTGTTTCATGCTGCTCAGAACAATATTGGTTATGGTTATACTTTTAGCTGCTTTTCTAATTCCTTATTTTGGACTTGTGATGGCTTTAATTGGTTCTTTCCTCAGTACATTTGTGGTAAGCCAAGCATGCAATTAA 363 0.3719 MSLVRLLMLNLGYLMFGDEVLPQITLNLPTNAFASKISLWIISKFSLILNKCALTMNPLARSLEELLPHRISSTTWCFMLLRTILVMVILLAAFLIPYFGLVMALIGSFLSTFVVSQACN* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1789 120 PANTHER OS05G0424000 PROTEIN-RELATED 11 114 - -
Amo18g1789 120 Pfam Transmembrane amino acid transporter protein 11 114 IPR013057 -
Amo18g1789 120 PANTHER AMINO ACID TRANSPORTER AVT1A 11 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1789 Amo-Chr18 38979838 38980601 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1789 11 100 Amino Acid or Auxin Permease AAAP Family AT2G41190 56.522 4.49e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1789 K15015 - gmx:100816431 129.028