Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1752 ATGACCCCTTTGGCCTTCTCTCAATTCTATGAAAAATGGTTTGATCTTCTCCATCACCTTGTCAATGAGCTCTCCGACTTTGCTTCTTCCATCGCCAACTCCAAGGAAGAGTATATTTCTCCCTTGGTAGCGGCGAAGCAGGAAGAGAAGTTGGCSCAACTGATTGGCAAAGTGATGTTGCACCATGAGGAGTACTTCAGGGCGAAGTCACTCATCACGGAGAATGACCCCTTAAGCGTGGTGGCTTCTCCGTGGGCCACCACACTTGAGAGGTCTCTTMATTGGGTCACTGGGTGGAGRCCTACTACGGCTTTYCACCTGGTGTACACGGAATCCTCTGTGTTGTTTGAGTCCCACATCGGAGATATTCTCCGTGGTGTGAATACCGGCGACCTTGGTGACCTTTCTCCAACGCAGTTCCGGCGAGTCAGTGAGTTGCAATGTGACACTGTGAAGGAAGAGAATCAAATAACAGATGAGCTTTCAGATTGGCAAGACACTGCGAGTGACTTGATGGGACCACGCGCCGAGAGCAAAGAGAGGATCGAACGGCTGGTATGCATCATCAAGAAAGCGGATGATCTACGGCTCAGAACGATGCGCAGCGTGGTTAGCTTGCTGTTGCCGCAGCAGGCGATTGAGTTCCTCATAGCGTCTGCAGAGATGCTCGTGGGAATCCGCGGGTGGGGATCGAATCACGACCGTCCATGTGGCAGATAA 720 0.5139 MTPLAFSQFYEKWFDLLHHLVNELSDFASSIANSKEEYISPLVAAKQEEKLAQLIGKVMLHHEEYFRAKSLITENDPLSVVASPWATTLERSLXWVTGWRPTTAFHLVYTESSVLFESHIGDILRGVNTGDLGDLSPTQFRRVSELQCDTVKEENQITDELSDWQDTASDLMGPRAESKERIERLVCIIKKADDLRLRTMRSVVSLLLPQQAIEFLIASAEMLVGIRGWGSNHDRPCGR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1752 239 PANTHER - 5 237 - -
Amo18g1752 239 Pfam Seed dormancy control 45 110 IPR025422 GO:0006351|GO:0043565
Amo18g1752 239 ProSiteProfiles DOG1 domain profile. 3 236 IPR025422 GO:0006351|GO:0043565
Amo18g1752 239 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 5 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1752 Amo-Chr18 36736905 36739635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1752 50 236 Calmodulin-binding Proteins AT5G65210 24.752 1.26e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1752 - - adu:107459966 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1752 18 36736905 36739635 Amo18g1752 18 36736905 36739635 ECH
Amo18g1752 18 36736905 36739635 Amo07g2336 07 69873987 69877030 hybridization