LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo18g1735	ATGGGCTTTAGGGGGAGAGGCGCGTCTATAAAAGTTTGGAGTAGTGCAGAAACCCTAGTTCCGAGTTGGAGTGCCTACAAGTATGTCTCTGAGCTATGGCGCAAGAAGCAGTCAGATGTCATGAGGTTCCTTCAGCGTGTAAGGTGCTGGGAATATCGTCAGCAACCTTCCATTGTTCGTGTGACAAGACCTACACGCCCTGACAAGGCCCGTCGCCTAGGTTATAAGGCTAAGCAGGGCTATGTTGTTTACCGTGTTCGTGTAAGGAGGGGTGGCCGCAAGAGACCAGTTCCCAAAGGTATTGTTTATGGTAAGCCAACAAACCAGGGTGTTACCCAACTGAAATTCCAGAGGAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGAAGGAAGTTGGGTGGCCTTAGGGTCCTCAATTCTTATTGGGTGAATGAGGACTCAACCTACAAGTACTTTGAGATAATTATGGTAGATGTTGCCCATGCTGCCATCAGAAACGATCCAAGAATCAATTGGCTGTGCAATCCAGTGCACAAACACAGGGAATTGCGTGGACTTACTTCAGCTGGCAAAAGCAACAGAGGTCTACGTGGCAAGGGACATCTTTATCACAAAAATCGTCCATCCCGCAGGGCAACCTGGAAGAGAAACAACACCCTTTCCCTTCGTCGTTATCGTTGA	681	0.4905	MGFRGRGASIKVWSSAETLVPSWSAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIIMVDVAHAAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGKGHLYHKNRPSRRATWKRNNTLSLRRYR*	227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo18g1735	226	Pfam	Ribosomal L15	24	212	IPR000439	GO:0003735\|GO:0005840\|GO:0006412
	Amo18g1735	226	SUPERFAMILY	Ribosomal proteins S24e, L23 and L15e	23	217	IPR012678	GO:0003735\|GO:0005840\|GO:0006412
	Amo18g1735	226	Gene3D	Ribosomal protein l15e	23	226	IPR024794	GO:0003735\|GO:0005840
	Amo18g1735	226	MobiDBLite	consensus disorder prediction	186	208	-	-
	Amo18g1735	226	ProSitePatterns	Ribosomal protein L15e signature.	68	91	IPR020925	GO:0003735\|GO:0005840\|GO:0006412
	Amo18g1735	226	SMART	Ribosomal_L15e_2	24	215	IPR000439	GO:0003735\|GO:0005840\|GO:0006412
	Amo18g1735	226	PANTHER	RIBOSOMAL PROTEIN L15	16	226	IPR000439	GO:0003735\|GO:0005840\|GO:0006412
	Amo18g1735	226	PANTHER	RIBOSOMAL PROTEIN L15	16	226	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo18g1735	Amo-Chr18	35888315	35890524	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo18g1735	25	226	Cytoplasmic Ribosomal Protein Gene Family	AT4G16720	91.584	1.33e-125	352

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo18g1735	K02877		-	gmx:100306052	387.111