Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1717 ATGGATGATGAATACATAATCATTGGATCTGCTAATATCAACGAGAGATCAATGAATGGTGGAAGAGACACTGAAATTGCTATGGGAGCTTATCAACCCTCCTATTTGGCAACCAATAAAAATGGTGCAAGGGGCCAGATCCATCGCTTTCGCTTGTCCTTGTGGTACGAGCATCTTGGCATATATGAAGAAACTTTCCTCAACCCTGAACTTGAAGGTTGTATTAAGAGGGTCCATCAGCTTGCTCAAAACAATTGGAACAGATATACAGGACAACCATTATGCACTTGTGGCCACCTCCTGCGCTATCCCATTGAAATTTCTCTTGATGGAAGTATCACACATGATCCTGAAATATTCCCCGACACCCATGCAAGAATTCGAGGTAGTCAACACTTAGATAGTTGGGTGGTTCGTAATATAAGGTGGGTGCGGGCACAAAAGCTGAGTTTAGTATTCTGTATTAGATAG 471 0.4225 MDDEYIIIGSANINERSMNGGRDTEIAMGAYQPSYLATNKNGARGQIHRFRLSLWYEHLGIYEETFLNPELEGCIKRVHQLAQNNWNRYTGQPLCTCGHLLRYPIEISLDGSITHDPEIFPDTHARIRGSQHLDSWVVRNIRWVRAQKLSLVFCIR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1717 156 Pfam Phospholipase D C terminal 63 130 IPR024632 -
Amo18g1717 156 SUPERFAMILY Phospholipase D/nuclease 2 72 - -
Amo18g1717 156 PANTHER PHOSPHOLIPASE D ALPHA 3 1 133 - -
Amo18g1717 156 PANTHER PHOSPHOLIPASE D 1 133 IPR015679 -
Amo18g1717 156 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 17 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1717 Amo-Chr18 34989518 34993271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1717 1 131 Phospholipase D Gene Family (Wang group) AT1G52570 58.519 1.10e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1717 K01115 - ahf:112749031 284.263