Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1715 ATGGGAACACCCTTCAAGCCAATACCGAGCACAAGAAGAAGCACATACTATAGACTAGAAACCAAGAACTTATCTTACAAATTGTGCAGCCAATTTGATGAGTTTAGAAGCCTTTGTTTCGGGTCGAATCGGAGGAGGAGGAGCAGCGCAGGGAAATACATTTTGAAGGATGTTACTTGTGAAGCAAGGCCAGGGGAGTTGACAGCCATTGCTGGCCATAGTGGAGCTGGAAAAACCACCCTGCTTGAAATCCTTGCTGGGAGAATATCTCCCGGTAAAGTTTCCGGCCAATTGCTGGTGAATCATCGGGCGATGGATCCGAACCGGTTCAGAAGAATTTCAGGTTATGTGACACAGGAAGATGCTCTGTTTCCATGTCTTACAGTGAGAGAGACACTCATGTATAGTGCTATGCTGAGGCTTCCCGGGGGCAAAAAAGTGGCTGCTACAAGAGTTGAGGAGTTGATGAAGGAGCTTGGGTTGGATCATGTTGCGGATTCAAGAATTGGTGATGGATCAAGCCATGGAATTTCGGGTGGCGAAAGGAGGAGAGTCTCTATTGGTGCTGATTTAGTTCATGACCCTGCAGTTATCTTGATTGATGAACCAACTTCAGGGTTGGATTCTGCTTCAGCTCTTAATGTAATCTCATTGCTTAGACTAATGGCATTCAATCAAGGAAAGACTATTGTTCTGACTATCCACCAACCTGGTTTTCGCATCTTGGAGCTTCTTGATGGCCTCATTTTGCTCGCGGATGGATTCGTCGTGCACAATGGTTCCTTGAGTCTTCTTGAGGCTAGGCTCAGGCTATCCGGCCATCAAATTCCGCGTCGCGTCAATGTCCTTGAATATGCACTTGATGTCATGGAAAGCTTGGTTATTCATACATCATCAGAGTCTGAGGACAATCAATATCTTCTTAGAGACAGAGAGTATGAAGATCACAGGATGAGAATGCATTGTTCCAAGATTGCTAAAGAAAAGGCTCTCTTGTACTCCAATTCTCCTATGGAAGAGATTCTAATCTTAGGAAGAAGATTTTGCAGCAACATATTCAGAACTAAGCAACTCTTTCTCACCAGAGTTATACAAGCCTTAGTAGCTGGATTCATTCTTGGAACTATATTCTTGAATACAGGTAACAAGCAAGGTCAATTAGCATTGCAAACGCGAAGCGGCTTCTTCGCTTTCAGCCTTACCTTTCTGTTATCTTCCACTACAGAAGGCTTGCCAATTTTCTTGGAAGAGAGAAGAACTTTGATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTCTTGCAAATACACTTGTTTTTCTTCCTTTCCTTCTAATGGTTTGTGTTCTATATACCACCCCGGTTTATTGGCTTGTAGGATTAAGGAAAGACATTGATGCATTCCTCTACTTCTCTCTAGTTGTTTGGTTGGTCCTCCTCATGTCGAACTCTCTTGTGGCGTGTTTCAGCGCTCTTGTGCCGAATTTCATCCTTGGAAACTCAGTGATCGCAGGCCTAATGGGGTCTTTCTTTCTGTTTTCGGGGTATTTCATATCGAAGGAGAAGATGCCTAGCTACTGGATTTTTATGCACTATTTGAGTTTATTCAAATACCCTTTTGAGTGTCTTATGATAAATGAGTATGGAGAAGAGCAAGGAAGAAGAAGATGCCTAGAAACTAGGAATGGAGAATGCATATTGCATGGAGTTGAGTTCTTAGAACAACAGGGTTTGAAGGAGTCAAAAAAGTGGACCAATTTGGTTGTAATGTTGGGGTTCATAATAGGGTATAGAGTTCTTTGCTTTTGTATTCTTTGGTTCAGATGTTACAGAACCAGAAACTGA 1854 0.4277 MGTPFKPIPSTRRSTYYRLETKNLSYKLCSQFDEFRSLCFGSNRRRRSSAGKYILKDVTCEARPGELTAIAGHSGAGKTTLLEILAGRISPGKVSGQLLVNHRAMDPNRFRRISGYVTQEDALFPCLTVRETLMYSAMLRLPGGKKVAATRVEELMKELGLDHVADSRIGDGSSHGISGGERRRVSIGADLVHDPAVILIDEPTSGLDSASALNVISLLRLMAFNQGKTIVLTIHQPGFRILELLDGLILLADGFVVHNGSLSLLEARLRLSGHQIPRRVNVLEYALDVMESLVIHTSSESEDNQYLLRDREYEDHRMRMHCSKIAKEKALLYSNSPMEEILILGRRFCSNIFRTKQLFLTRVIQALVAGFILGTIFLNTGNKQGQLALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTLMRETSRGAYRVSSYVLANTLVFLPFLLMVCVLYTTPVYWLVGLRKDIDAFLYFSLVVWLVLLMSNSLVACFSALVPNFILGNSVIAGLMGSFFLFSGYFISKEKMPSYWIFMHYLSLFKYPFECLMINEYGEEQGRRRCLETRNGECILHGVEFLEQQGLKESKKWTNLVVMLGFIIGYRVLCFCILWFRCYRTRN* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1715 617 SMART AAA_5 64 255 IPR003593 -
Amo18g1715 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 609 - -
Amo18g1715 617 Gene3D - 34 273 IPR027417 -
Amo18g1715 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 609 - -
Amo18g1715 617 Pfam ABC transporter 55 205 IPR003439 GO:0005524
Amo18g1715 617 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Amo18g1715 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 278 IPR003439 GO:0005524
Amo18g1715 617 Pfam ABC-2 type transporter 235 305 IPR043926 GO:0140359
Amo18g1715 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 266 IPR027417 -
Amo18g1715 617 Pfam ABC-2 type transporter 340 551 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1715 Amo-Chr18 34955545 34957398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1715 54 265 Calmodulin-binding Proteins AT2G36910 25.581 6.41e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1715 K05681 - gmx:100776372 969.533