Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1651 ATGGGGTTTCTCCGGCGACTCTTCGGCGGCGGAGGAAAGAAGAACCACCACCATACTCCGCCGCCGGGAAAGGAAAAACGGAGCTGGAGCTTTGTGAAACAAAGCACCAGAGACAACAAATCCAACAACAATAACGGCTATGACAACTTCACCGACAACTTGGACCCCAACAGGCACGCCATCGCCGTCGCCGCCGCAACCGCCGCCGTAGCTGAGGCAGCTCTCGCAGCCGCACATGCCGCAGCAGAGGTTGTCAGGCTCACCAGCGGCGGCGGGGCCGCCACGCCGGCGCAGGTTCAACTCCGGCTGGCGGAGGAAATCGCCGCCGTGAAAATACAGTCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTACAAGCACTGGTGAGAGGCCACATTGTGAGGAAGCAGAGTGCGGATATGCTGAGGCGCATGCAAACTTTGGTGCGCCTCCAGGCTCGTGCACGTGCGAGTCGCGTGCACTTGTCTGACAACATGCCTTCTTTCAAGTCTTCACTTTCTCATTACCCTGTTCCTGAAGAGTATGAGTATCCACTTCGTGCCTATAGTACGAAATTTGATGGATCTTCTATCCTCAAGAGATGTTGTTCCAATTCAAATTTTAGGGACATTGAGTTAGAGAGAGCCCGATTCGGTTCCAGTTGGTTAGACAGTTGGATGGAACAAAGTGCGTGGAGCCAAACTGGCAATGCTTCAAAGAAAAACGGGCACATAGATGACGAGAAGAGTGACAAGATTCTTGAAGTTGATACTTGGAAGCCACACATGAATTCCCACAATAACAGTAGCAGCTCATTCAAGGCACCACAACATTATTTCGCTCCAGATTACAGCGACAACTTTCTCATGGCATATGAATCTCCATCGAAACGTTCCTCGAAAGCGCTAAATACAAGTTTCTCATCTAGGGAAGTGTTGCCCTTAGGTTCTCCTAGATTCCACAAAGGAAAAGAAGTGGTGATGGCTTCAAGAACCGCAGAGAATAGTCCCCAAGCATTTTCGGCCTCATCTAGGCTCAGTAATGGTGGAAGGAGAGGCCCTTTCACACCAACAAAGAGCGAGTGTTCTTGGGGTTTCTTCAATGGATATACTAGTCACCCAAGCTACATGGCTAACACTGAATCTTCAAGAGCTAAGGTTAGGTCACAAAGTGCTCCAAGGCAAAGGCTTGAGTTTGAGAGATATGGTTCAACAAGAAGGAGTTTTCAGAATCCTTGGGATGCAAGGCCTAACCCAAGTTCTACCTCAAGCCAATTTAACTGA 1311 0.4989 MGFLRRLFGGGGKKNHHHTPPPGKEKRSWSFVKQSTRDNKSNNNNGYDNFTDNLDPNRHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGAATPAQVQLRLAEEIAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQARARASRVHLSDNMPSFKSSLSHYPVPEEYEYPLRAYSTKFDGSSILKRCCSNSNFRDIELERARFGSSWLDSWMEQSAWSQTGNASKKNGHIDDEKSDKILEVDTWKPHMNSHNNSSSSFKAPQHYFAPDYSDNFLMAYESPSKRSSKALNTSFSSREVLPLGSPRFHKGKEVVMASRTAENSPQAFSASSRLSNGGRRGPFTPTKSECSWGFFNGYTSHPSYMANTESSRAKVRSQSAPRQRLEFERYGSTRRSFQNPWDARPNPSSTSSQFN* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1651 436 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Amo18g1651 436 Pfam IQ calmodulin-binding motif 129 146 IPR000048 GO:0005515
Amo18g1651 436 MobiDBLite consensus disorder prediction 7 52 - -
Amo18g1651 436 MobiDBLite consensus disorder prediction 413 436 - -
Amo18g1651 436 MobiDBLite consensus disorder prediction 340 363 - -
Amo18g1651 436 Gene3D - 104 157 - -
Amo18g1651 436 MobiDBLite consensus disorder prediction 34 52 - -
Amo18g1651 436 Pfam Protein of unknown function (DUF4005) 345 421 IPR025064 -
Amo18g1651 436 SMART iq_5 127 148 IPR000048 GO:0005515
Amo18g1651 436 SMART iq_5 104 126 IPR000048 GO:0005515
Amo18g1651 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 150 IPR027417 -
Amo18g1651 436 PANTHER CALMODULIN-BINDING PROTEIN 1 428 - -
Amo18g1651 436 MobiDBLite consensus disorder prediction 388 436 - -
Amo18g1651 436 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Amo18g1651 436 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Amo18g1651 436 PANTHER IQ-DOMAIN 5-RELATED 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1651 Amo-Chr18 33318091 33322777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1651 1 407 IQD Protein Family AT5G07240 45.863 1.49e-57 194