Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1632 ATGGTGGGGTCAGGAGGTGGTGGTGGTGGAACAGGAGAGAGGAGCAAGGAGGCTGTTGGGATGATGGCACTTCATGAGGCACTCAGAACCGTCTGTCTTAACTCTGACTGGACCTACTCTGTCTTCTGGACCATCCGCCCACGCCCGAGAGTTAGAGGTGGCAATGGTTGCAAGGTTGGAGACGATAACGGCAGCCTGATGCTGATGTGGGAAGATGGGTTCTGCCGAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGACGGAGGAGGAGAGGATCCAGTGAGAAAGGCCTTCAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTCAAAGAGCCCACAGAATGTGAGCCTAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGACCAGTTTGATTCTGGCATTCAGACTATTGCTGTAATTCAAGCTGGACATGGCCTTCTTCAGCTAGGCTCTTGCAAGATTATTCCGGAGGACCTCCATTTTGTGCTAAGAATGAGACACACATTTGAATCACTTGGCTACCAATCGGGATTCTACCTCTCACAACTCTTCTCTTCAACAAGGAACACTTCATCTTCAACTTCAATCCCTTCAAAACCATCTTCCATTCCAATTAGGCCTCCAGCACCACTCTTCAACTGGCCTCACAGGCCATCGCTTCCATCTTCGGCCGCCTCAATGCTCTCCTCGCCCAATTTTGCTGCATCGAGGATGGGATTCCCAAACAAGGACTCTGAGACACACATGTTTCTCATGCCACACCATCACCACCATCACCAAGAGCATGGTGCAAGGATTGAGGACATGATTGGAACTAACACTACTAGTGGTGATCATGAGAATGATATCAAGTGGCCTAATGGATTGTCCTTCTTCAATGCTTTAACCGGCCGAACCGACGAAGCCAACAAGCTATTGCAGGAACAAGCATTGAACATCAGTCATCAGAACCCCAATTCGGATTCTTCAAGCATGCAACAAAATGCAAACCCAAATGAGTTCCTCAGCTTGGAAACAGGACACCCTGAAGGTGGTTCTGCTGCTGCAAGGAAAATGGATAAGTTCAAGAGGAGCTTCACTTTACCTGCAAGAGTTGTTTCATCATCTTCATCAACTTCAATGGATCAACATCAACAACAAGGTAATGCTGTGGAGTATAGGAATTCAGATGGAGCTATGTTTCCGGATGTTATGGAAACCTTTTTGGAGTGA 1287 0.4763 MVGSGGGGGGTGERSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRSASLVEDMDGGGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSIPSKPSSIPIRPPAPLFNWPHRPSLPSSAASMLSSPNFAASRMGFPNKDSETHMFLMPHHHHHHQEHGARIEDMIGTNTTSGDHENDIKWPNGLSFFNALTGRTDEANKLLQEQALNISHQNPNSDSSSMQQNANPNEFLSLETGHPEGGSAAARKMDKFKRSFTLPARVVSSSSSTSMDQHQQQGNAVEYRNSDGAMFPDVMETFLE* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1632 428 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 24 194 IPR025610 -
Amo18g1632 428 PANTHER GB|AAF34833.1 1 428 IPR044170 -
Amo18g1632 428 PANTHER GB|AAF34833.1 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1632 Amo-Chr18 32513894 32516370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1632 25 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.034 1.85e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1632 - - aip:107614137 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1632 18 32513894 32516370 Amo18g1632 18 32513894 32516370 ECH
Amo18g1632 18 32513894 32516370 Amo08g1631 08 26873534 26876063 hybridization