Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1605 ATGTCGATGACGCTGAGTTATTTACCGTTCGATATAATGTCGATGGAGGCGAATGGGTTTGTGGAGCGAAGCTACGAGTTTTCATCTAATTTTGATCGAGTCCATGCGCTGCAGGTTGTGGAGGATGGGATGAGCGGCGAAACCGTGCCGGTGGAGGAAGCAGAAGCGATGGATTTGTCAGCCGTAGATGCAGACATAGATGTAGAAGAATCAGTGAGGATCGTTGACGGGATTGGGTCGTTTGGCGGAATTGAATTTTCAACTCTGACAGCGAAGGACATCCTTACGACGGAGTTCATAAACTTGCAGGCAGCTTATGACTACTACAACGAATACGGTCGCATTAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAAGGGGCGGAGGGTGAAATCATTTGGCAGATTTTTGTGTGCTCGTGGGAAGGAGAGCGAAATGGGAAACACATGCAACAGGGAGACAGGAAGATGGATCCTCGACCTATCACACGGTGCGGGTGTGAAACTCGGATAAAGGTGCACGTTGATGATACTAGACTGAAGACAACATCGAGGTGCGAGGCTTTGAATATGCACATTGGAAAATTTATACACAACGGGTACAATTTGAGAGAGTTTGTGGAGCACTTCCAACACTATCTGGAATGCATGAGAAGAAGAGAATTGGTGGCAGACTACAAGTCTGCATACGGTGAACCTATAGTAAAAACAAAACTCGAAGCCATTGAGCAGTTCGCGGCGACAGTTTATACAAAAGAGGTTTTCGAACTGTTTCGGGAGGTGCTGATGCTAGCCAGCAATGTGAGAGTTGTGTTCACCAAAAGAACGAATGCTTGTGTTTTGTTCGAGGTTGCAATGTACTGCAAGCAGAGATCATGGGCCGTGTCATCGGCTCAGGAAGACGACTAA 924 0.4751 MSMTLSYLPFDIMSMEANGFVERSYEFSSNFDRVHALQVVEDGMSGETVPVEEAEAMDLSAVDADIDVEESVRIVDGIGSFGGIEFSTLTAKDILTTEFINLQAAYDYYNEYGRIKGFSVRRSKVGRRTKQGAEGEIIWQIFVCSWEGERNGKHMQQGDRKMDPRPITRCGCETRIKVHVDDTRLKTTSRCEALNMHIGKFIHNGYNLREFVEHFQHYLECMRRRELVADYKSAYGEPIVKTKLEAIEQFAATVYTKEVFELFREVLMLASNVRVVFTKRTNACVLFEVAMYCKQRSWAVSSAQEDD* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1605 307 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 66 186 - -
Amo18g1605 307 Pfam FAR1 DNA-binding domain 107 182 IPR004330 -
Amo18g1605 307 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1605 Amo-Chr18 31501832 31504050 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1605 FAR1 5.9e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1605 - - ahf:112777976 285.804