Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1574 ATGGCTTCCTCAACCTTAATGTTATTTCTTCTGGTCTTGTACTTTTCATTTCAATTCTCGTCATCTTTAGATGCACTGAACAAAGGCTACTCCTCTCTCTCAGTGGACAAAGCCGAACAAGATGTCATTGTTTCAGAAAATGGCATGTTCTCTGCGGGCTTCTTTGAAGTTGGTGATAATGCCTTCTCCTTTGCAATATGGTTCACTAGAAGGACTGATTCCCAAAATATTACAACTCCTACTGTTGTTTGGATGGCAAATCGTGACCAACCTGTGAATGGAAAGCGCTCAAAGATTTCTCTCTTGCACACCGGCAATCTTGCTTTGGTAGATGCAGGTCAGTTCCAAATATGGTCTTCTGAGACCGAGTCATATCTTCCAACAGAATTACGACTCGGAGATGATGGCAATCTTGTTCTACGAGAGTTGCAAGGAGGACGTATTCTGTGGCAGAGTTTTGATTTCCCAACGGACACTCTTCTTCCCGGACAACATCTCACCAGAAGTACACAGTTAGTTTCTTCAAGAACAGAGAGTAACCATTCCTCTGGTTTCTATAAGTTGTCCTTTGACAATAGAAACGTTCTTACCCTTCTTTACGATGGCCCTGACGTGTCGAGCACTTATTGGCCCGATCTTGTGCTCASAGTTTGGGAAGCTGGAAGGTTTACTTACAATAGTAGCAGAATTGCRGTGCTAAATCCTCTTGGACATTTYGATTCGTCAGATAATTATAGTGTAAGAACATCTGATTACGGTGTGATGCTGCCTAGAAGGTTGACAATCGATCATGATGGAAATCTTCGAGTGTACAGTCAAGATCTATCACAAAAATGGTACGTCTCAATGCAAGCCATTTCTAACAGTTGCAGCATTCATGGGATTTGTGGTGCAAATAGTGTTTGCAGATTTGATTCTAAAAAGGGAAGGAAATGTTCATGTGTTCCTGGGTACAAAGTGAAGAATCAAAGTGATTGGTCTTATGGGTGTGAATCCATTTTTTCTGCTACGTCTAATGAAAGTGACTTTACTTTCTTGGGATTGGACCGAGTTGAGTTCTATGGCTATGACTACAATTTCATACCCAATTGTACCTACACTGATTGTGAAAACGGGTGCTTGAATAGTTCTCATTGCAAAGGGTTTCAGTATTCATATGACAACGTTAAGGGCGTCTTCAAGTGCTATCAAAAAAGAGAATTGCTCAACGGACATTTGCCAGGAGCTGCGAGAACTATAACCTACTTGAAAGTGCCCAAAGGGAAAAGCTTTCCCCCCAGCTATGAAGACTCTGTCATCAGAAACAGTGATTGTTCTGTGAAAATTCATAGAGAATATTTGAAAAAACATGTAAGCCATTTTGTGAGCTTCCTTTTGTGGTTTGCCGCTGCAATTGGAGTTCTTGAAATGACTTGCATTTTTGTTGTTTTATTCTTAATCAAGTGCCAGCACAATTCTAGCATAGATCCACATGGCCATCATCTTGCAGCGGTGGGATTCAGAAAATTTAGCTATTCTGAGCTAAAAAAGGCGACAAAAGGATTCAGCCAAGAGATTGGAAGGGGTGCAGGAGGCACTGTATACAAAGCTCTATTGTCGGATCAAAGAATTGCTGCTGTAAAGAAACTCAATGATGCTAAGCAAGGAGAAGGTGAATTCCTTGCTGAAGCGAGCATCATTGGAAGGCTCAACCACATGAACTTGATTGAAATGTGGGGTTATTGCGCCGAGGGAAAGCATCGGCTATTGGTGTACGAGTACATGGAAAATGGTTCTTTGGCAGATAACCTCTCATCCAATACACTTGATTGGAGCAAGAGGTATAACATCGCTCTCGGAACAGCAAGAGGTTTGGCATATTTACATGAAGAATGCTTGGAATGGATTTTGCACTGTGATATAAAACCTCAAAATATTCTCTTGGATTCAAATTATCAACCCAAGGTTGCAGATTTCGGATTGTCCAAGTTATTGAACAGAGATGTTCTCACCAACAATCCAAATTTCTCAATGATAAGAGGAACCAGAGGGTATATGGCGCCTGAGTGGGTTTTCAACCTAGCAGTTACTTCCAAAGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATGATAACTGGAAAGAATCCGACAGCAGATATTCAAGCAATTAATGGAGAAGAACCATACAATGGGAGGCTAGTAACATGGGTGCGAGAGAAAAGGAGAGAATGTGCATCTTGGGTGGAGCAAATCTTGGATTCTGCATTAGGGTCAAATTATGATGAGAATAAGATGGACATTCTGGCTAGAGTGGCTTTGGGTTGCATAGAAGAGGACAAAGAAGAGAGGCCTACCATGAGCCAAGTCGTTGAAGTGCTTCAAAACCAAGATTGTGATCCTAATGTACATGTCTTTGTATCGGATGGGGCACATCCTCACATCAGGGAAATCCATTTGAAATTGGAGGAGCTTGGTGAAAAGCTAAGATTGATTGGTTATGTACCACAAATTGGAACATGTGCTTCATGA 2514 0.4129 MASSTLMLFLLVLYFSFQFSSSLDALNKGYSSLSVDKAEQDVIVSENGMFSAGFFEVGDNAFSFAIWFTRRTDSQNITTPTVVWMANRDQPVNGKRSKISLLHTGNLALVDAGQFQIWSSETESYLPTELRLGDDGNLVLRELQGGRILWQSFDFPTDTLLPGQHLTRSTQLVSSRTESNHSSGFYKLSFDNRNVLTLLYDGPDVSSTYWPDLVLXVWEAGRFTYNSSRIAVLNPLGHFDSSDNYSVRTSDYGVMLPRRLTIDHDGNLRVYSQDLSQKWYVSMQAISNSCSIHGICGANSVCRFDSKKGRKCSCVPGYKVKNQSDWSYGCESIFSATSNESDFTFLGLDRVEFYGYDYNFIPNCTYTDCENGCLNSSHCKGFQYSYDNVKGVFKCYQKRELLNGHLPGAARTITYLKVPKGKSFPPSYEDSVIRNSDCSVKIHREYLKKHVSHFVSFLLWFAAAIGVLEMTCIFVVLFLIKCQHNSSIDPHGHHLAAVGFRKFSYSELKKATKGFSQEIGRGAGGTVYKALLSDQRIAAVKKLNDAKQGEGEFLAEASIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLADNLSSNTLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRDVLTNNPNFSMIRGTRGYMAPEWVFNLAVTSKVDVYSYGIVLLEMITGKNPTADIQAINGEEPYNGRLVTWVREKRRECASWVEQILDSALGSNYDENKMDILARVALGCIEEDKEERPTMSQVVEVLQNQDCDPNVHVFVSDGAHPHIREIHLKLEELGEKLRLIGYVPQIGTCAS* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1574 837 CDD STKc_IRAK 519 790 - -
Amo18g1574 837 SMART blect_4 34 156 IPR001480 -
Amo18g1574 837 Gene3D Phosphorylase Kinase; domain 1 481 587 - -
Amo18g1574 837 Pfam D-mannose binding lectin 81 171 IPR001480 -
Amo18g1574 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 210 IPR036426 -
Amo18g1574 837 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Amo18g1574 837 Gene3D - 157 284 IPR036426 -
Amo18g1574 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Amo18g1574 837 CDD B_lectin 43 156 IPR001480 -
Amo18g1574 837 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 793 - -
Amo18g1574 837 ProSiteProfiles Protein kinase domain profile. 513 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1574 837 SUPERFAMILY Protein kinase-like (PK-like) 488 790 IPR011009 -
Amo18g1574 837 Gene3D - 34 154 IPR036426 -
Amo18g1574 837 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 793 - -
Amo18g1574 837 Pfam S-locus glycoprotein domain 256 321 IPR000858 GO:0048544
Amo18g1574 837 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Amo18g1574 837 Pfam Protein kinase domain 516 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1574 837 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1574 837 Gene3D Transferase(Phosphotransferase) domain 1 588 801 - -
Amo18g1574 837 PIRSF SRK 1 807 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1574 Amo-Chr18 30886241 30889804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1574 503 788 Trihelix Transcription Factor Family AT5G38560 41.837 9.07e-63 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo18g1574 Pkinase 6.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1574 - - gmx:100784823 1042.72