Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1563 ACCAACCCGTGTGCTCCACCTAGCCGTCGAACTGCTTTCGTTTGTCGCCGCCGTGAGTTCCCTAAACCCACCACCAGACAATACACTCACACAACACCAATACTCTGTATTCTTGATAGAGGTATTCAGCTTAATGGTCTTGGCATGAAGAGCTTCATGACTTATGAAAGCAATGTACTTTTTTCCCTTCGCTTCATGATTGATTGCAATATAGCTGGTGTTGACCCTGATATTATAATTGGATATAACATCTGCAAATTTGACCTGCCATATCTTATTGAGAGAGCTCAAGCCTTGAAAATAGCAGAATTTCCTATTRTGGGCCGTATCAGGAACAGTAGGGTCCGAGTAAAGGATACAACTTTTTCATCTAGAAAACCTGGAAGAGGCAAGAGCAAAAAGCTAGTAACCTTAAGAAGAGGCAAGGATTTGCATTTACCAATCAGTGAGCATAGTTTAGTTTCTGTTGCTTTATTGTTCTTGATATTTTGCTCAGTTCTAACTTGTATTGTTTTTGTATTTTTCTTCGGTTTTTAG 537 0.3966 TNPCAPPSRRTAFVCRRREFPKPTTRQYTHTTPILCILDRGIQLNGLGMKSFMTYESNVLFSLRFMIDCNIAGVDPDIIIGYNICKFDLPYLIERAQALKIAEFPIXGRIRNSRVRVKDTTFSSRKPGRGKSKKLVTLRRGKDLHLPISEHSLVSVALLFLIFCSVLTCIVFVFFFGF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1563 178 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 72 138 - -
Amo18g1563 178 Pfam DNA polymerase family B, exonuclease domain 74 128 IPR006133 -
Amo18g1563 178 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 17 73 - -
Amo18g1563 178 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 17 73 - -
Amo18g1563 178 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 72 138 - -
Amo18g1563 178 Gene3D - 15 140 IPR036397 GO:0003676
Amo18g1563 178 SUPERFAMILY Ribonuclease H-like 54 137 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1563 Amo-Chr18 30555345 30559418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1563 37 73 Core DNA Replication Machinery Family AT5G63960 75.676 3.69e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1563 K02327 - ahf:112769782 107.842