Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1546 ATGGCGGGGAAATCTCTAACCGGGTTTTGCTTCATCCTCCTCCTCCTCGTTGTTGCTCAGGAAATGGTGGTGCAAAGTGAGGCAGCAACGTGTGAGAACCTGGCGGATACCTACAGGGGACCATGCTTCACCACTGGAAGCTGCGACGACCACTGCAAGAACAAGGAGCACCTGCTCAGCGGCCGCTGCCGCGACGATTTCCGCTGTTGGTGCACCAGAAACTGTTAA 228 0.5614 MAGKSLTGFCFILLLLVVAQEMVVQSEAATCENLADTYRGPCFTTGSCDDHCKNKEHLLSGRCRDDFRCWCTRNC* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1546 75 PANTHER DEFENSIN 1 75 - -
Amo18g1546 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Amo18g1546 75 SMART gth_4 30 75 IPR003614 GO:0006952
Amo18g1546 75 SUPERFAMILY Scorpion toxin-like 30 75 IPR036574 -
Amo18g1546 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Amo18g1546 75 Pfam Gamma-thionin family 30 75 - -
Amo18g1546 75 Gene3D - 29 75 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1546 Amo-Chr18 30271604 30272579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1546 11 75 Plant Defensins Gene Families AT2G02130 38.806 3.00e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1546 - K20670 gmx:100779239 144.05