Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1530 ATGCAAACCAGCTGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAATATTATTCCAAACTTGCCAGTTTGTCTACCAAAACCAGGAACACGACTCGGGACGTAGACAAGATTAAGAATCAACTAATTACAAATTCTTCAGCTGGGTTAAATTGTCCGGCCAGAATTTATGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTTCAAACTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCAAGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTCGTGTGTCGCACCATTGAAACCCACGAGGAAGTCAGAATCAGACCGAATAAAACTTACCAATCATTTGTGGTAGTAGCTGGTAGCCATCGTGAACTAGAGCTATACGAAAATCGACATATATGGATTCTGGTTTACTTGGATCACCACTTTTGGGCTGGGATGAGAAGAACGCAAAGGAGTGAGAGTATGCATTCATTTTTCAACAAGTTCATCACACAGAATAGCTCGTTGAGACAATTCAGAGAATTTGATGCTGCAGATTTTCACACTGTGATACCGTGCGCAACAAAATCAGTAATAGAGGCACAGTTTCAGCGTGTATATACCCATGAGAAGTTCAGGAAAGTTCAAGCTCAATTTAGAGGTAAAGTGAATTGTATCACAAGATCAATGCATTCCACCCTAGGTTTCACAACATATGAAGTCATAGAGCAGGTTTCCAACTCCACATTCAACAAGTTTGTCGTCACCTATGATGCAGTATCACGAGATGTAAAGTGCCATTGTTTGCTTTTTGAGTCTAGGGGCATATTGTGCTGCCATTCCCTAAGTATTCTAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGGAACATTGGAGCAAGAACATAAAGAGGAGGCATACACACATCAAGAGCAGCCAAGATAAACCTCTACTCGAGCCAAGAAGTAAGAGATTTGATGAATTAATGTTTCGGTCACACAATATATGTGAATTTGCATCTGAGTCTGAAGAGTTGACCAGAATTTTGCATCGAGCATTTGACAAG 1113 0.4043 MQTSCVVDEKFVPKVGMIFKTLEEAGKFYKYYSKLASLSTKTRNTTRDVDKIKNQLITNSSAGLNCPARIYVHIMKDVGLWTIFKLVLNHSHPCCPDQAEMLKQHRELSMFVCRTIETHEEVRIRPNKTYQSFVVVAGSHRELELYENRHIWILVYLDHHFWAGMRRTQRSESMHSFFNKFITQNSSLRQFREFDAADFHTVIPCATKSVIEAQFQRVYTHEKFRKVQAQFRGKVNCITRSMHSTLGFTTYEVIEQVSNSTFNKFVVTYDAVSRDVKCHCLLFESRGILCCHSLSILSFERVDNVAPKYILEHWSKNIKRRHTHIKSSQDKPLLEPRSKRFDELMFRSHNICEFASESEELTRILHRAFDK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1530 371 SMART 26again6 276 303 IPR006564 GO:0008270
Amo18g1530 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 108 IPR031052 GO:0006355
Amo18g1530 371 ProSiteProfiles Zinc finger SWIM-type profile. 265 301 IPR007527 GO:0008270
Amo18g1530 371 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 144 334 IPR031052 GO:0006355
Amo18g1530 371 PANTHER OS03G0843700 PROTEIN 144 334 - -
Amo18g1530 371 PANTHER OS03G0843700 PROTEIN 9 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1530 Amo-Chr18 29902543 29904585 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo18g1530 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1530 - - adu:107484182 444.506