Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1519 ATGTCTGAATTCGACACTAACATCTCAACTGCTTTTGATCCCTTTGCTGAGGCAAATGCTGACGACTCAGGTGCTGGGGCAAAAGAGTATGTTCATGTGCGTATACAACAACGCAACGGAAGGAAAAGCCTGACAACTGTTCAAGGATTAAAGAAAGAATTCAGCTATACTAAGATACTCAAAGACCTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTACAGGACCCTGAGTTAGGCCAGGTCATACAGCTTCAGGGAGATCAAAGAAAGAACGTTTCAACTTTCCTTGTCCAAGCGGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.4211 MSEFDTNISTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1519 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Amo18g1519 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Amo18g1519 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Amo18g1519 113 Gene3D - 1 113 - -
Amo18g1519 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Amo18g1519 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Amo18g1519 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Amo18g1519 113 SUPERFAMILY eIF1-like 9 113 IPR036877 GO:0003743|GO:0006413
Amo18g1519 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 8 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1519 Amo-Chr18 29795149 29797336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1519 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 86.726 5.01e-73 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1519 K03113 - gmx:100784390 219.935