Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1493 ATGAAGGGATATGAGCCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAATTACTCAAGAGAAGATGCATCCCCAACTGCATCTTCGCGCCGTATTTTCGCTCCGATGAGTGCAAGAAATTCGCGAAAGTTCACAAGGTGTTCGGYGCAAGCAATGTGAGCAAGATCCTCATTGAGGTCCCTGAAGAGCAAAGAGAGGACACGGTGAATTCTCTCGCTTATGAGGCCGAAGCCAGGCTCCGCGACCCYGTTTATGGATGCATTGGCGCCATAGCGCTCCTTCAGAGGAAGATGGTAGAGTTACAACACGATCTGGCGATAGCTAAAGATCGCCTGGCTCGTGTTGTAGCTTCTACTACATCTGCCTCTGAGTCTGCTTTGGTCGCTACTACTACTTTTAGTAGTAGCGATGAAATTATGCATGGTTCTTCTTATTCCCATGTTAGCTTGCCCCCTTTTCCTTGCAGTGATTTCAGTGATAGCTTCTGCCATAGCTCTTCTTCTTCATCTCAATTCTTGAGCCGACATGATCAAGCGGTTGATGATTTCACTCAAATRCCATACATATTTTAA 570 0.4632 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARVVASTTSASESALVATTTFSSSDEIMHGSSYSHVSLPPFPCSDFSDSFCHSSSSSSQFLSRHDQAVDDFTQXPYIF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1493 189 Coils Coil 90 110 - -
Amo18g1493 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 162 - -
Amo18g1493 189 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Amo18g1493 189 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Amo18g1493 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1493 Amo-Chr18 28752679 28753628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1493 1 111 AS2 family AT3G11090 81.081 1.55e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo18g1493 LOB 1.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1493 - - gmx:100305534 250.751