Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1484 ATGGAACGAGAGATGGTGGACATTGAATCTCAAACTAATCATCAAGAAGTGCCTAACAATGTCTTCCACAAGAGAAATCCTCCGGTGACTCTCAAGTTTGAAGATGTTGTGTACAAAATAAAGATTGAGAATGGTGGAATATTGGAGAAGAAGAAAAAGGCATCAGAACGCAAAGTGATATTGAATGGAGTATCAGGAATTGTTCAACCGGGTGAGATCCTTGCAATGTTAGGTCCGTCAGGAAGTGGCAAGACAACACTGCTGACTGCATTGGGCGGCCGTCTCGGCGGCCGCCTCAAAGGAAAGATAACATACAATGGAGACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTACACCCTCATTTGACAGTAACTGAAACCCTTGTTTTCACCGCTCTCCTCCGCCTACCTAACACGGTAGCCAAGGAGGAGAAGGTGGCATTGGCAAAAGTCGTCATAAACCAACTTGGATTGGTCAAGTGTAAAGACAGTATTGTCGGAGGCCCCGGCCTACGAGGGGTTTCGGGTGGAGAAAGAAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTCCTTGATGAACCAACCTCGGGTTTGGATTCAACTACCGCATTAAGACTTGTGTCAACTTTGTTTGAGCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTACTATATGTTCACTAAGGTGTTGCTTCTTTCAGAAGGGAACACTGTTTATTTTGGAAAGGGTTCGGAGGCATTGGATTATTTCTCTAGTGTTGGATTTTCTCCAGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGGGATATACACCAACGAATTGAACGAGGATGTTGTGGTGGACAAAAAACAATTGATTCAGGCATACAAGAGCTGTAACGCTGATTCCCAATTGAGGCAAATGGTTCAAGAAACGAATAGAAACTCATCAAGTAGAGTTGAGAACACAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCACGGTGTTGTTGAGAAGAGACCTTAAAGAGAGAAAGCACGAAGCATTCGCTTCCTTCAATATTATTCAGGTCGTCTTGACTTCTTTCATTGTAGGACTATTGTGGTACAAGTCTGATACCGCACACATGCAAGATCAGCTTGGACTTCTATTCTTCTTATCAAGTTTCTGGGCATTTTATCCGCTGTACAGAGCAATCTTCGTGTTCCCAGATGAAAGAGTGATGTTGGAGAAAGAAAGATCTTCCGGAATGTACAGACTATCCTCATACTTCATGGCCAAGATGACGGTAGACCTTCCAATGGAACTCGTCCTCCCAACCGTTTCCATTCTTATAACCTACTGGATGGCAGCTCTGAAAGCTACCGCCGCCGCCTTCATCTTCATGCTCCTCACTATCCTCACCCTTGTGTTGGTCTCACAAGGCATAGGACTCGCTCTCGGCGCCTGTGTCCAGAACACCAAAGTGGCCACCACCTTCGCCTCCGTCATAGGGCTAACCTTCATGATAACAAGTGGATTCTTTGTCCAGAATGTTCCCAAATTCATAGCATGGTTGAAGTACATTTCTTTCATATATTACGCCAACGAACTCGTTATATTTTCTCAGTATCGTGAAGGTGAGACTTACAAATGTGGTAAGGGTAAGTGCTTGATTTATGAGTACCCTGGAATCAAGGGTTTAGGGTTCGTTAATAATAGAGAGAGTCAATTAAGGGCTTCATTGATTTTGCTAGCAATGCTGTTTTTCTATAGGTTTATAGCTTATGTTGCTCTTATGAGAATTGGAGTCACAAAGAAATCAAAGTCTAGCTAG 1893 0.4369 MEREMVDIESQTNHQEVPNNVFHKRNPPVTLKFEDVVYKIKIENGGILEKKKKASERKVILNGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLKGKITYNGDPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVAKEEKVALAKVVINQLGLVKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFELARGGRTIVMTIHQPSSRLYYMFTKVLLLSEGNTVYFGKGSEALDYFSSVGFSPALAMNPADFLLDLANGIYTNELNEDVVVDKKQLIQAYKSCNADSQLRQMVQETNRNSSSRVENTAGFGKWPTNWWQQFTVLLRRDLKERKHEAFASFNIIQVVLTSFIVGLLWYKSDTAHMQDQLGLLFFLSSFWAFYPLYRAIFVFPDERVMLEKERSSGMYRLSSYFMAKMTVDLPMELVLPTVSILITYWMAALKATAAAFIFMLLTILTLVLVSQGIGLALGACVQNTKVATTFASVIGLTFMITSGFFVQNVPKFIAWLKYISFIYYANELVIFSQYREGETYKCGKGKCLIYEYPGIKGLGFVNNRESQLRASLILLAMLFFYRFIAYVALMRIGVTKKSKSS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1484 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 275 IPR027417 -
Amo18g1484 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 622 - -
Amo18g1484 630 ProSitePatterns ABC transporters family signature. 183 197 IPR017871 GO:0005524
Amo18g1484 630 Pfam ABC transporter 61 211 IPR003439 GO:0005524
Amo18g1484 630 Gene3D - 48 277 IPR027417 -
Amo18g1484 630 SMART AAA_5 70 260 IPR003593 -
Amo18g1484 630 Pfam ABC-2 type transporter 357 562 IPR013525 GO:0016020|GO:0140359
Amo18g1484 630 MobiDBLite consensus disorder prediction 1 23 - -
Amo18g1484 630 Pfam ABC-2 type transporter 240 343 IPR043926 GO:0140359
Amo18g1484 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 283 IPR003439 GO:0005524
Amo18g1484 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 13 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1484 Amo-Chr18 28502045 28506344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1484 60 244 Calmodulin-binding Proteins AT2G36910 30.366 3.44e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1484 K05681 - gmx:100816135 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1484 18 28502045 28506344 Amo18g1484 18 28502045 28506344 ECH
Amo18g1484 18 28502045 28506344 Amo08g1542 08 25301344 25305640 hybridization