Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1476 ATGAAGACCCAAAGCTTCTTCATTCCACCGCCCATTTCCTCCAAAACCTTACCTCTCTGGCTCTATCACCCACTCCTACTCCCCGCTAGACTCCACCAACCACCGTTCCCTTGCTCTCGCCCTCTGTTTCCTCCTTCCTTCGCTGCGGCATTAGGGAACTCCGAGAAAGAATCGATACCGTTAAGAACAATCACAAGATCACCGAAGCATCACGTCCGCCAGGGTCCGACGGGACCAAGAAGCCGTCCTGAACGGCAGGCCCTATACCGAGACGCTCGTCGAAGTCTTTCACGACATCAACTGCCGTCTCGGAGCGACGACGTCCCCCTAACGAACGTCAGGACCGGGAACTCCGTCGCCCTCGTTGTCAAAGCCGAAACTCGGATCCAACAGCTACACAAGCTTGGCTTGAATTGCGTTGTGATAAGCGTTGAGAAGAAGGGGAACGCGTTTTTCAGCCTTCAAATCATTGCTGATGATGTGTACTCACTGTTTGTTACAGAGGAGGTTGACAAGGTTGAGATTGTTTTCACCAAGTGTGTCATTGGCGAGCTTCGCCATGTAAATGGGAACTGCATTGATGCCATTGATGATGAGTATTTTAAGCTGAGGAGGAAGGAAGGGAGGTTGGCAGTGGAGAGGGATGTTGCTGTGAGGGAATTCGCTGCGCCGCCGGTTATGGATGAGCTTGCTGCTAGGATGGCTGCAATGTCTAATGCACCCGATAATGCTGTCGAACTGAAGAAGAATCTTTCGGTTGCTTATAATCATAAACGGCAGGCAAAGATCAGAGGAGAGATATTGGAGATTGTGACTGTAGCTGAAGCACTAACACCAATTGATTGA 846 0.5059 MKTQSFFIPPPISSKTLPLWLYHPLLLPARLHQPPFPCSRPLFPPSFAAALGNSEKESIPLRTITRSPKHHVRQGPTGPRSRPERQALYRDARRSLSRHQLPSRSDDVPLTNVRTGNSVALVVKAETRIQQLHKLGLNCVVISVEKKGNAFFSLQIIADDVYSLFVTEEVDKVEIVFTKCVIGELRHVNGNCIDAIDDEYFKLRRKEGRLAVERDVAVREFAAPPVMDELAARMAAMSNAPDNAVELKKNLSVAYNHKRQAKIRGEILEIVTVAEALTPID* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1476 281 Gene3D ATP synthase, gamma subunit, helix hairpin domain 204 278 - -
Amo18g1476 281 MobiDBLite consensus disorder prediction 63 86 - -
Amo18g1476 281 Pfam ATP synthase 229 277 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo18g1476 281 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 120 153 - -
Amo18g1476 281 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 228 281 - -
Amo18g1476 281 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 155 227 - -
Amo18g1476 281 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 125 277 IPR035968 GO:0015986|GO:0045261|GO:0046933
Amo18g1476 281 PANTHER ATP SYNTHASE GAMMA CHAIN 120 153 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo18g1476 281 PANTHER ATP SYNTHASE GAMMA CHAIN 228 281 IPR000131 GO:0015986|GO:0045261|GO:0046933
Amo18g1476 281 PANTHER ATP SYNTHASE GAMMA CHAIN 155 227 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1476 Amo-Chr18 28241061 28242145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1476 107 277 Primary Pumps ATPases AT1G15700 42.471 7.57e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1476 K02115 - qsu:112000322 171.014