Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1457 ATGTATATAGTGTATACTAATGATATTTTGTCAAGTAATGGGGAAAATGGAGCCTTTGATGTTTTCTTGGGGAAAACAACACTATTTCCGCCAAATAGTGTGCTAGAACATGAAGTCCCCGTTTACAAAGCTCTTAAAATGCCAGGGGAGTTTGTGATAACCTTCCTAGGACATACCATGCTGGATTTAGTCATGCCGGATATTGCACTGCTTAATAGGATTCCTTTACTTCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTGTATGCATCCATGGAGCTTGAAGCATCTGCAAACGTGATTGTTATGTAG 318 0.3962 MYIVYTNDILSSNGENGAFDVFLGKTTLFPPNSVLEHEVPVYKALKMPGEFVITFLGHTMLDLVMPDIALLNRIPLLPHEELLCKEAMLLYASMELEASANVIVM* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1457 105 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 4 55 - -
Amo18g1457 105 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 69 99 - -
Amo18g1457 105 Gene3D Cupin 8 60 - -
Amo18g1457 105 PANTHER LYSINE-SPECIFIC DEMETHYLASE 4 55 - -
Amo18g1457 105 PANTHER LYSINE-SPECIFIC DEMETHYLASE 69 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1457 Amo-Chr18 27616013 27616651 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Amo18g1457 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1457 - - gmx:100798611 125.561