Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1439 ATGGCATCAACATTGTCTAGCACTGTTGTGAAGCCAACACCTTTCCTTGGACAAGGAAGGGGAACCAACAACAACACTCTGAGAGATGTTGTCTCCATGGGAACTGGGAAATACACCATGGGGAATGAATTGTGGTATGGGCCAGATAGAGTGAAATACTTGGGACCCTTTTCTGCTCAAACACCTTCATATTTGACTGGAGAGTTCCCTGGAGATTATGGTTGGGACACTGCTGGTTTATCTGCTGACCCTGAAGCTTTTGCCAGGAATAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCATTAGGTTGCATCACCCCAGAAATTCTTGAGAAGTGGGTCAGAGTTGACTTCAAGGAGCCTGTTTGGTTCAAAGCTGGGGCCCAAATCTTCTCAGAAGGTGGGCTTGACTACCTTGGAAACCCAAACCTTGTTCATGCACAAAGCATCCTTGCAGTCCTGGGCTTCCAAGTAGTCCTAATGGGCCTTGTTGAAGGGTTCCGCATTAATGGGCTTCCTGGTGTTGGAGAAGGGAACAACCTCTATCCTGGTGGGCAGTACTTTGACCCATTGGGCCTTGCCGATGACCCAGTTACTTTTGCTGAGCTCAAGGTCAAGGAGATCAAGAATGGAAGGCTTGCCATGTTTTCCATGTTTGGGTTCTTTGTTCAGGCCATTGTAACTGGTAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTTTATGCCACCAAGTTTGTGCCTGGTTCTTAG 792 0.4848 MASTLSSTVVKPTPFLGQGRGTNNNTLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEILEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1439 263 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 5 263 - -
Amo18g1439 263 Pfam Chlorophyll A-B binding protein 62 229 IPR022796 -
Amo18g1439 263 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 263 IPR001344 GO:0009765|GO:0016020
Amo18g1439 263 Gene3D Chlorophyll a/b binding protein domain 52 256 - -
Amo18g1439 263 SUPERFAMILY Chlorophyll a-b binding protein 44 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1439 Amo-Chr18 27127778 27129329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1439 5 262 Chloroplast and Mitochondria Gene Families AT2G05070 67.416 7.52e-123 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1439 K08914 - qsu:112007400 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1439 18 27127778 27129329 Amo18g1439 18 27127778 27129329 ECH