Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1409 ATGAAAAACTCTTTTCACCATCCCTCCTGCGCTAGCCTATGGTGCATCTGGCTCCCCTCCAACTATTCCTCCGAATGCTACACTCCAGACATATGTAAGGATGGTGGTATATTTAAGAAAATACTTAAGGAGGGGAAAGGATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAGGTTCTTCTGGAAGATGGAAAGGCTGTGGCTAAGTCTGATGGAGTTTATTTTGTAGATGGATTTGGTGAGAAAGGGAAGCCAACAGATGGTGATGAAGGAGCAGTTCCACAAAATGCAACATTGCAGATTACTCTCGAGTTAGTCTCTTGGAAGACTGTGTCTGAGGTAACTGATGACAAGAAAGTGGTGAAGAAAATACTTAGTGAAGGGCAAGGATATGAGCGGCTAAATGAGGGGGCTGTTGTGAAAGGTGACTATTAA 447 0.4318 MKNSFHHPSCASLWCIWLPSNYSSECYTPDICKDGGIFKKILKEGKGWENPKDPDEVLVKYEVLLEDGKAVAKSDGVYFVDGFGEKGKPTDGDEGAVPQNATLQITLELVSWKTVSEVTDDKKVVKKILSEGQGYERLNEGAVVKGDY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1409 148 Gene3D - 28 82 IPR046357 GO:0003755
Amo18g1409 148 PANTHER PEPTIDYLPROLYL ISOMERASE 88 125 - -
Amo18g1409 148 SUPERFAMILY FKBP-like 30 116 - -
Amo18g1409 148 PANTHER PEPTIDYLPROLYL ISOMERASE 29 79 - -
Amo18g1409 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 88 125 - -
Amo18g1409 148 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 29 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1409 Amo-Chr18 26331272 26332009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1409 30 145 Calmodulin-binding Proteins AT3G25230 60.959 7.57e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1409 K09571 - aip:110263818 207.608