Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1395 ATGGTCTGCACTGACTTTGAAAATGAATTGAACCATTTAGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCSTTGGGGGAGATCAAACTGAGGCGAAAACTAATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTACAACTGATTGATGATTCATTAAGCAACGCTTCTGATGCAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTCACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 735 0.4054 MVCTDFENELNHLDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAXGGDQTEAKTNRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLQLIDDSLSNASDATEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCHNKGFLASNQNTCSENEVTISVVEAR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1395 244 ProSiteProfiles Protein kinase domain profile. 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1395 244 SUPERFAMILY Protein kinase-like (PK-like) 11 198 IPR011009 -
Amo18g1395 244 SMART serkin_6 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1395 244 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Amo18g1395 244 Pfam Domain of unknown function (DUF3403) 199 244 IPR021820 GO:0004674
Amo18g1395 244 Pfam Protein tyrosine and serine/threonine kinase 11 196 IPR001245 GO:0004672|GO:0006468
Amo18g1395 244 Gene3D Transferase(Phosphotransferase) domain 1 7 212 - -
Amo18g1395 244 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 228 - -
Amo18g1395 244 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-1 13 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1395 Amo-Chr18 25781040 25782027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1395 13 240 Receptor kinase-like Gene Family AT4G23150 54.585 3.58e-83 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1395 PK_Tyr_Ser-Thr 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1395 - - adu:107462504 461.455