Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1394 ATGCATGGCTCTTTCTCGATGAAATCTGATGTGTTTAGCTTTGGCGTAATTATGCTTGAGGTCGTTAGTGGGATGAAGAACAAGGAACTCTCTATCCCGCACCAATTTGTTAACCTTCTTGGACATGCATGGGAATTGTGGACTAAGGAGAGGGCTATGGAGCTTGTAGATAAATCGCTTGGTGATTCAGTTGTTGAAGCTCAAGTATTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAACACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAGCCGCTTGCTCGGCCAAAGCAGCCAGCATTTTATCCTCACCAAGAAAGTAATTCTTCAACTAAAACYAGTGAAATGTGTTCAAATAATGATATTTCCATCACACTGTTGGAGGCCAGATAG 423 0.4208 MHGSFSMKSDVFSFGVIMLEVVSGMKNKELSIPHQFVNLLGHAWELWTKERAMELVDKSLGDSVVEAQVLRCIHIGLLCVQERPEHRPNMSSVIHMLNDDKPLARPKQPAFYPHQESNSSTKTSEMCSNNDISITLLEAR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1394 140 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Amo18g1394 140 Pfam Protein tyrosine and serine/threonine kinase 2 97 IPR001245 GO:0004672|GO:0006468
Amo18g1394 140 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 140 - -
Amo18g1394 140 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 140 - -
Amo18g1394 140 MobiDBLite consensus disorder prediction 112 126 - -
Amo18g1394 140 SUPERFAMILY Protein kinase-like (PK-like) 3 122 IPR011009 -
Amo18g1394 140 Pfam Domain of unknown function (DUF3403) 102 140 IPR021820 GO:0004674
Amo18g1394 140 MobiDBLite consensus disorder prediction 105 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1394 Amo-Chr18 25762096 25764070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1394 1 140 Receptor kinase-like Gene Family AT4G23140 45.638 4.67e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1394 PK_Tyr_Ser-Thr 4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1394 - - ahf:112769728 286.189