Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1389 ATGGAAGCCTTTAGCCTTCTCCTGTTATGCTTCTCTCTGCTGAATTTAATACCATTTTGTGCTCCAAGAGACACAATTAACACACTGCAATCTATCAGTGATGGTGAGACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATTTGGTATAACAAAGATCCAAAAAAGGCAATAGTATGGGTTGCAAACAGAGAAACACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACACCACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATCTGGTCATCCAACACGACAGGATCGGCACGAAGTCCGGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACAGCAATAGCGACACGGAAGATTTTGTGTGGCAAAGTTTTGCCTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTAGCTACAGGACTAAATCGGAGGGCAACATCATGGAAAAGCTCTGATGATCCTTCTCCAGGTAGCTTTAGCTATCAAGTCGAGATTGATGGATATCCGCAATTAGTATTAAGAGATGGCACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAGTTTAGTGGGGGACCACAGTTGAAAAATGACTCTGTATTTAGATTTAGCATAATTTCTGATGAGGAAGAAACATACAGTGTATTTTGGCTTGTTGATAGTTCAGTGCATCAAAGGGTTCAGATAACATCGGACGGATTCTGCCAGCGGGCGAGTTGGAGTGCTGGAAATACAGGTTGGACCAGAATTTCGCACTTACCGGTGGATTACTGTGATTACTATGGAAACTGTGGAGCATATGCTAGTTGTGATACAACCAGGTTTCCCATGTGTAATTGCTTGGATGGATTTGTGCAGAATACAACTGATTCATCAAGTGGTTGTGTTAGGAGAACTTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACACGGTTTAATAGAAGCATGAGACTTGAGGATTGTAGGATCTTGTGCTGGAACGATTGCTCTTGTATGGCTTATGCAGCTTTGGATGTCAGCAAAGGGCCAAATGGTTGTTTACTTTGGTTTGGTAATCTGATAGATATGAAAGTGATGAATGCATCTGTTGAAGATATTTATATAAAGATGGCAGGGAAAGAAGTAGAAGCAATTGAACAAAATAGATCAACGAAGTCCAAGAAACGGAAGCAAAAGATTATCATTGCCGTAAGCTGTGTGTTATCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATAATCTATGGATGGAAGAAGTATCACAAAGGAAAGATAAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCCTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGGTATCTTGGAAAATGGACGGGAAATAGCTGTCAAGAGACTTTCACAAAATTCAAGCCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAGCTATTAGGGTATTGCATTCAAGCAGGGGAGAGAATATTGATTTATGAATTTATGCGCAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAAGGGAAAGCTTCTAGACTGGCCAAAGCGTTTTCTTATTATTAATGGAATTGTTAGGGGTCTTCTCTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAGGCTGGAAATATTTTGTTAGATGACGAATTGAATCCTAGAATTTCAGACTTTGGACTAGCAAGAAGCTTTGTAGGAAATGAAAACCAAGCAAATACAAGGCACATTGTTGGAACTTACGGCTATCTGTCACCGGAGTACATAGTTGATGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTACTGGTGTTAGAGATAGTTAGCGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTTAATCTGCTTGGGCATGCATGGACACTTTTCTCAGAAGGCAAGTGCTTACAAATAGTCGATCCATCTATCAAAGACTCTATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTGCTATGCGTGCAACTAAATTCCGAGGATCGACCAAGCATGTCGTGTGTGCTTACGATGCTGAGTAGTGAATGGGCATTGCCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGTTGGTAACCGTTCTTCGTCAAGCAACAATAAACTACTGTCTGTTAATAATCTAACAGCTACTCAGGTCTGTCCCCGATAG 2451 0.4023 MEAFSLLLLCFSLLNLIPFCAPRDTINTLQSISDGETLVSADETFALGFFSPGTSKNRYVGIWYNKDPKKAIVWVANRETPLTDSSGVLKVNTTGILVLLDSNNSLIWSSNTTGSARSPVAKLLNSGNFVVQDDSNSDTEDFVWQSFAYPGDTILPGQKLGRNLATGLNRRATSWKSSDDPSPGSFSYQVEIDGYPQLVLRDGTTKRFRFGSWNGIQFSGGPQLKNDSVFRFSIISDEEETYSVFWLVDSSVHQRVQITSDGFCQRASWSAGNTGWTRISHLPVDYCDYYGNCGAYASCDTTRFPMCNCLDGFVQNTTDSSSGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTRFNRSMRLEDCRILCWNDCSCMAYAALDVSKGPNGCLLWFGNLIDMKVMNASVEDIYIKMAGKEVEAIEQNRSTKSKKRKQKIIIAVSCVLSFGILILCLAFIIYGWKKYHKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSGILENGREIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGYCIQAGERILIYEFMRNKSLDFFIFDCEKGKLLDWPKRFLIINGIVRGLLYLHQDSRHRIVHRDLKAGNILLDDELNPRISDFGLARSFVGNENQANTRHIVGTYGYLSPEYIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNFNLLGHAWTLFSEGKCLQIVDPSIKDSIDLPEVLRSIHVGLLCVQLNSEDRPSMSCVLTMLSSEWALPQPKKPGFFIERDVVGNRSSSSNNKLLSVNNLTATQVCPR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1389 816 SMART blect_4 29 150 IPR001480 -
Amo18g1389 816 CDD STKc_IRAK 508 770 - -
Amo18g1389 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Amo18g1389 816 PIRSF SRK 1 816 IPR024171 GO:0004674
Amo18g1389 816 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Amo18g1389 816 Pfam D-mannose binding lectin 72 176 IPR001480 -
Amo18g1389 816 Pfam Domain of unknown function (DUF3403) 771 816 IPR021820 GO:0004674
Amo18g1389 816 CDD PAN_AP_plant 328 413 - -
Amo18g1389 816 SUPERFAMILY Protein kinase-like (PK-like) 486 770 IPR011009 -
Amo18g1389 816 CDD B_lectin 30 150 IPR001480 -
Amo18g1389 816 Pfam Protein kinase domain 504 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1389 816 Gene3D Phosphorylase Kinase; domain 1 476 574 - -
Amo18g1389 816 Gene3D Hepatocyte Growth Factor 328 410 - -
Amo18g1389 816 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Amo18g1389 816 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Amo18g1389 816 Pfam PAN-like domain 332 398 IPR003609 -
Amo18g1389 816 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1389 816 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 808 - -
Amo18g1389 816 PANTHER - 12 808 - -
Amo18g1389 816 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Amo18g1389 816 Gene3D - 20 148 IPR036426 -
Amo18g1389 816 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1389 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1389 Amo-Chr18 25670652 25674325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1389 446 816 Receptor kinase-like Gene Family AT3G45860 50.000 4.84e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1389 Pkinase 2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1389 - - adu:107462379 1596.25