Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1388 ATGCGCAGCGGATATTTATCACCCGAGTACATAATTGATGGAGTTTACTCAACGAAATCCGATGTATTCAGTTTTGGTGTATTGGTGTTAGAAATAGTGAGTAGGAGTAGAAATAGAGGATTCACTCATCAAGATCATAACTTCAATCTTCTAGTACATGCATGGAAATTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGATATACGTCAAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTGCTTTGTGTGCAAAAAGGTCTAGATGACAGGCCAACCATGTCATCTGTCGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGTCTGGATTCTTCACAGAAAGAGAAATGATTGATGAAAGTTCTTTTCCAAGTAATAACAGAACATGCTCAATCAATGATGTCACAGACAGCATATTGGAGGTTAGATAG 465 0.3656 MRSGYLSPEYIIDGVYSTKSDVFSFGVLVLEIVSRSRNRGFTHQDHNFNLLVHAWKLFMEDKGYEIIYAPIRYTSNLSSMLRSIHVGLLCVQKGLDDRPTMSSVVQMLSSESTLPPPKMSGFFTEREMIDESSFPSNNRTCSINDVTDSILEVR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1388 154 Pfam Protein tyrosine and serine/threonine kinase 5 108 IPR001245 GO:0004672|GO:0006468
Amo18g1388 154 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 4 128 - -
Amo18g1388 154 Gene3D Transferase(Phosphotransferase) domain 1 2 115 - -
Amo18g1388 154 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1388 154 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 128 - -
Amo18g1388 154 SUPERFAMILY Protein kinase-like (PK-like) 4 130 IPR011009 -
Amo18g1388 154 Pfam Domain of unknown function (DUF3403) 109 154 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1388 Amo-Chr18 25666202 25666751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1388 3 146 Receptor kinase-like Gene Family AT4G23140 41.935 5.32e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1388 PK_Tyr_Ser-Thr 2.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1388 - - ahf:112769704 213.001