Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1382 ATGGCTTTGTGTTCAGATATTAGATTCAATAATAATATTCTTTTGGTTTTGTTGTTGCTATTTGGCAATGAAGCTTTGGGTGTGTTTTGTTCGGTGCTGGCAGAACAAGAGGCTGATAGAGTTTACAGGCTACCGGGGCAGCCTGTGGTGAAGTTCAAGCAATACGCTGGTTACATCACTGTCAATGAGACTCATGGAAGAGCACTCTTCTACTGGTTCTTTGAGGCTACCGACAAACCTGAACACAAACCACTCCTTCTCTGGCTCAATGGAGGACCAGGCTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAACTAGGACCCTTCTTTCCCCAAAATAGCAGCCAACCAAAGCTAAAGTTGAACCCTTATTCTTGGAACAAAGCCGCAAATCTTTTGTTTTTGGAATCCCCTGTGGGAGTGGGATTCTCCTACACCAACACCAGCAGTGATATTAAGGCTCTTGGTGACAAAATTACTGCTATTGATTCTCACATTTTTATCACCAAATGGTTTAAACGATTTCCACAATTTAGATCACACGAATTCTACATTTCAGGCGAAAGCTATGCAGGGCACTATGTTCCTCAACTTTCAGAGCTCATATTTGATAACAATCGTGATCCTTCCAAGGAAGACTACATTAAATTCAAAGGATTCATGATTGGGAATGCACTATTGGATGATGAAACAGATCAAAAGGGAATGGTAGATTATGCATGGGACCATGCTGTGCTATCAGATGGTGTATACCATAATATCACATCAAACTGTGACTTCAGATATGCAAATCTAACAGATGAAGGTCTATCAAAGCCATGCAATGATGCACTCAAGAAGTATTTTGATGTGTATAAAATCATTGACATGTATAGCTTATACACTCCAATGTGTTTCACTAACACCAACAGCTCCACCAGAAGGAATACCCCTAAAGTTATCAAGGGCGTTGCTCCTCACACTTTCTCTAAATTTGAAATGTGGCATCAAATACCAGCCAGTGGATATGATCCTTGTGCATCAGATTACACCGCAGCATATCTAAATAGGCCGGAAGTGCAAGAGGCACTACATGCCAATGTCTCCAAAATTCCCTACAAATGGACTCACTGCAGTGATCAAATCAACACTTGGAATGGGTCACCTCAGTCCATGCTTCCTATTCTCAAGAAGCTCGTTGATGGTGGAATTCGCATATGGGTTTTCAGTGGAGATACCGATGGAAGAATCCCTGTAACTTCCACAAGATTAACATTGAGAAAATTGGGGCTTAGCATTGTTCAAGATTGGACTCCTTGGTATACCAGCAGACAGGTGGGAGGATGGACGATTAACTATGATGGGCTCACTTTTGTTACAGTAAGAGGTGCTGGTCATCAGGTTCCAACTTTTCGTCCTAAGCAAGCTCTTCAGCTAATTAGACATTTCTTGGTGAACAAGAAATTACCGGAACACCCAATTAAACAGGGTCCCTTTTGA 1479 0.4178 MALCSDIRFNNNILLVLLLLFGNEALGVFCSVLAEQEADRVYRLPGQPVVKFKQYAGYITVNETHGRALFYWFFEATDKPEHKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSSDIKALGDKITAIDSHIFITKWFKRFPQFRSHEFYISGESYAGHYVPQLSELIFDNNRDPSKEDYIKFKGFMIGNALLDDETDQKGMVDYAWDHAVLSDGVYHNITSNCDFRYANLTDEGLSKPCNDALKKYFDVYKIIDMYSLYTPMCFTNTNSSTRRNTPKVIKGVAPHTFSKFEMWHQIPASGYDPCASDYTAAYLNRPEVQEALHANVSKIPYKWTHCSDQINTWNGSPQSMLPILKKLVDGGIRIWVFSGDTDGRIPVTSTRLTLRKLGLSIVQDWTPWYTSRQVGGWTINYDGLTFVTVRGAGHQVPTFRPKQALQLIRHFLVNKKLPEHPIKQGPF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1382 492 Gene3D alpha/beta hydrolase 35 300 IPR029058 -
Amo18g1382 492 Pfam Serine carboxypeptidase 46 478 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 Gene3D - 339 377 - -
Amo18g1382 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 486 IPR001563 GO:0004185|GO:0006508
Amo18g1382 492 SUPERFAMILY alpha/beta-Hydrolases 36 482 IPR029058 -
Amo18g1382 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 449 466 IPR033124 GO:0004185
Amo18g1382 492 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Amo18g1382 492 Gene3D - 385 478 - -
Amo18g1382 492 PANTHER CARBOXYPEPTIDASE 30 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1382 Amo-Chr18 25466297 25478047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1382 347 482 Calmodulin-binding Proteins AT2G22960 27.737 3.49e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1382 K16297 - gmx:100781503 758.829