Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1380 ATGAAGAATTGCAAGTGTTTGCCATTTCCTCCTCTTGCCAAAAAGGTAGGAGCAGAGTTCATTGGCACCTTTATATATGCTGATTTTTGCCAGAACAGCGGCGGGAATAATGAACGAGAAGACCAATTGATTGGTAACTCTTATGGGCTGCGCTGTCGTCATCGGCCTTGCGGTGACGGTGATCATCCTGTCCACCGGACACATATCCGGTGCTCATCTGAACCCTGCGGTCACCATTTGCTTTGCTGCCTTAAAGCACTTTCCATGGAAGAAGGTGCCAATGTATATTGGAACACAGATATTGGCATCAGTGTGTGCCGCATTTGCACTGAAGGAGTGTATCATCCGTTCATGGGGGGTGGAGTGACGGTTCCTTCAGGAGGATATGGCCAAGCTTTTACTTTAGAATTCATCATCAGCTTCAATCTCATGTTTGTTGTCACTGTTTTCGCCACTGACACTAGAACTGTTGGACAGTTCGCGGGAATGGCGGTGGGAGCCACTGTAACGTTCAACATCCTCATAGCTGGGTATGTCCTTCTATCAAAGTAA 552 0.4728 MKNCKCLPFPPLAKKVGAEFIGTFIYADFCQNSGGNNEREDQLIGNSYGLRCRHRPCGDGDHPVHRTHIRCSSEPCGHHLLCCLKALSMEEGANVYWNTDIGISVCRICTEGVYHPFMGGGVTVPSGGYGQAFTLEFIISFNLMFVVTVFATDTRTVGQFAGMAVGATVTFNILIAGYVLLSK* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1380 183 Gene3D Glycerol uptake facilitator protein. 93 180 IPR023271 -
Amo18g1380 183 PANTHER AQUAPORIN NIP5-1-RELATED 104 177 - -
Amo18g1380 183 SUPERFAMILY Aquaporin-like 102 178 IPR023271 -
Amo18g1380 183 Pfam Major intrinsic protein 107 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo18g1380 183 PANTHER AQUAPORIN NIP2-1 104 177 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1380 Amo-Chr18 25458012 25458844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1380 3 177 Major Intrinsic Protein MIP AT4G10380 41.089 2.40e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1380 K09874 - ming:122063799 124.79