Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1375 ATGGAAGCATTTAGCTTTCTCTTATTTTGCTTCTCTCTGCTTATGGCTGTCTCTATTGCAAGAGACACAATCAACACACTGGAATCTATAAGTGATGGTGAGATATTAGTTTCAGCAGATGAAACCTTTGCGTTGGGATTCTTCAGCCCCGGAACTTCCAAGAACCGTTATGTCGGAATTTGGTATAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCGTCAGGGGTTTTGAAGGTCAACAACATCGGAATTTTAGTCCTTCTTGATAGTAATAATAGTCTTATTTGGTCATCCAACACGACGCGATCGGCACGAAATCCGGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACAGCAATAGCGGCACGGAAGATTTTGTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTAGCTACAGGACTAAATCGGAGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCCAGGTAGCTTTAGCTATCAATTCGATATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAATTTAGTGGGGCACCTCAATTGAAAAATGAGTCTGTATTCAGATTTAGCATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGAGTGTTGATAGTTCAGTTCATCAGAGGCTGCAGATAGCAATGGATGGATTCAGCCAGCGGAGAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAACCATTTTCCAATGTGTGGATGCTTAGATGGATTTGTGCAGAATACTATTGACTCATCAAGTGGTTGTGTTAGGAGAACCTCATTAAGTTGCAATAACTCAGATGGGTTTGTGAAGTTTTCAGGGCTAAAATTACCAGACACAAAAGGAACTTGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGGATTTTGTGCTTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGTAAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGAAAGCTGATGGATATGAAAGTGATGACTGCATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTGCGAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCATAATCTGGGTGTTGTCTTCTGGAATTTTGATCTTATGCTTGACCATCATTATTTATAGATGGGAGATGCGTAAGAAAGGAAAGATAAAAGAAGAAAGAGAATCAGATGATTGTCAGCACGATGAGGAAGATCTAGAATTGCCCTTATTTGATATAAATACGGTTACTTCTGCAACAAACAATTTTTCAGCTGACAACTTATTAGGGAGAGGTGGTTTTGGACCAGTTTATAAGGGTATCTTGGAAGATGGACAGGAAATAGCTGTCAAGAGGCTTTCGAAGAATTCAAGCCAAGGATTCGAAGAGTTCAAAAATGAAGTTATGCATGTTTCCAAACTTCAGCACAGGAATTTAGTAAGGCTACTAGGGTGCTGCATTCAAGCTGGGGAAAGATTGTTGATTTATGAATTTATGAGCAACAAAAGCTTGGACTTCTTCATATTTGACTGTGAGAAGGGAAAGCTACTAGATTGGCCAAAGCGTTTTTGTATCATCAATGGGATTGCCAGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTGGGAATGTTTTGTTAGATGATGAATTGAATCCTAAAATCTCGGACTTTGGAACAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGGCTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGGAAGCGAAATAAAGGATTCATCGATATTGACCACTACTTTAATCTTCTTGCAGATGCATGGACACTTCTAGCCGAAGACAAGTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGACAGAAGTCATAAGAACAATTCATGTCGGTTTGCTATGTGTGCAACGAAATCCAGAAGATCGACCAAGCATGTCATATGTGCTTATGATGCTGAGTAGTGAATGGGAACTACCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGTTGGTGACCATTCTACATTAAGCAACAATGAACTCACGGCTACTCAGGTCCATCCGCGTTAG 2433 0.3942 MEAFSFLLFCFSLLMAVSIARDTINTLESISDGEILVSADETFALGFFSPGTSKNRYVGIWYNKDPTKAIVWVANREKPLTDSSGVLKVNNIGILVLLDSNNSLIWSSNTTRSARNPVAKLLNSGNFVVQDDSNSGTEDFVWQSFDYPGDTILPGQKLGRNLATGLNRRTTSWKSSDDPSPGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGAPQLKNESVFRFSMISNEEEVYIVYWSVDSSVHQRLQIAMDGFSQRRSWSGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNHFPMCGCLDGFVQNTIDSSSGCVRRTSLSCNNSDGFVKFSGLKLPDTKGTWFNTSMSFEDCRILCLKNCSCTAYAALDVSKGPNSNGCLLWFGKLMDMKVMTASEDIYVKMAGKDVEAIVRKRLPKFKKKKQKITTAIIWVLSSGILILCLTIIIYRWEMRKKGKIKEERESDDCQHDEEDLELPLFDINTVTSATNNFSADNLLGRGGFGPVYKGILEDGQEIAVKRLSKNSSQGFEEFKNEVMHVSKLQHRNLVRLLGCCIQAGERLLIYEFMSNKSLDFFIFDCEKGKLLDWPKRFCIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDDELNPKISDFGTARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGKRNKGFIDIDHYFNLLADAWTLLAEDKCLEIVDASIRDSINLTEVIRTIHVGLLCVQRNPEDRPSMSYVLMMLSSEWELPQPKKPGFFIERDVVGDHSTLSNNELTATQVHPR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1375 810 Pfam PAN-like domain 330 398 IPR003609 -
Amo18g1375 810 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Amo18g1375 810 ProSiteProfiles Protein kinase domain profile. 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1375 810 Gene3D Phosphorylase Kinase; domain 1 473 574 - -
Amo18g1375 810 SMART serkin_6 499 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1375 810 Pfam D-mannose binding lectin 70 174 IPR001480 -
Amo18g1375 810 SMART ntp_6 331 411 IPR003609 -
Amo18g1375 810 Gene3D - 15 145 IPR036426 -
Amo18g1375 810 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 802 - -
Amo18g1375 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Amo18g1375 810 CDD PAN_AP_plant 326 412 - -
Amo18g1375 810 CDD B_lectin 28 148 IPR001480 -
Amo18g1375 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 179 IPR036426 -
Amo18g1375 810 CDD STKc_IRAK 505 770 - -
Amo18g1375 810 SMART blect_4 27 148 IPR001480 -
Amo18g1375 810 PANTHER - 11 802 - -
Amo18g1375 810 ProSiteProfiles PAN/Apple domain profile. 330 412 IPR003609 -
Amo18g1375 810 Pfam Protein tyrosine and serine/threonine kinase 502 768 IPR001245 GO:0004672|GO:0006468
Amo18g1375 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Amo18g1375 810 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Amo18g1375 810 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Amo18g1375 810 SUPERFAMILY Protein kinase-like (PK-like) 481 783 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1375 Amo-Chr18 25179814 25185728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1375 451 810 Receptor kinase-like Gene Family AT3G45860 50.798 2.82e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1375 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1375 - - adu:107462379 1330.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1375 18 25179814 25185728 Amo18g1375 18 25179814 25185728 ECH