Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1374 ATGATTCTACTATGCTTCTTTCTGATGATGGTGGCTTCCACTGCAAAGGACACTATTGATTCACTGCAATCTATCAGTGATGGTGAGACAATAGTTTCAGCTGATGAAATCTATGCATTGGGATTCTTCACCCCTGGAACTTCCAAGAACCGTTACGTCGGAATCTGGTTTAACAAAGATCCATCCAAGACAGTAGTTTGGGTTGCAAATAGAGAAAAACCCCTCACTGATTCCTCAGGGGTTCTCAAGCTCAACAACACCGGAATTCTAGTCCTTCTTGATCATAATAATAGTCTTATTTGGTCCTCTAACGCAAAAAGATCCGTCCTGAATCCAGTAGCAAAGCTTTTGAATTCAGGAAATCTTGTTGTGCAAGAAAGAAGCAATAATGGTGCTAGCAAAACAGATTTCGTTTGGCAAAGTTTTGATTATCCATGCGACACAATCTTGCCTGGACAGAAGTTAGGAATAAACCTGAAAACAGGACAGAATCAATATCTAACCTCATGGAGCAGCTCGGATGATCCGTTTCCAGGTAGATATACTTTACAAATCAATATCAAGGGATATCCTCAAGTATTCATTAAAGAAGGTGCAAACAAAAGATTTCGTGCCGGATCATGGAATGGAGTTCAAATCAGTGGAACGCCACAATTGAAAGGAAACCCAATCTTTAGATATAAATATGTTTCGAACGAGGAAGAGATATATTTTATGTATGAACTTATCAATAATTCAAACCCTCATAAAGTGGTTCTAACGCCGGAAGGAATCAACCAGAGAAGCCAGTGGAATCCGGACACATCGAGTTGGACCAACTTGGCGAGGTTACCGGCTGATGATTGTGACTACTATGAAACATGTGGAGCTTATTCTAGTTGTAATATGGATTTGTGCAAGATAAATTATAAGGAGGAGCAAGGTTTATCAGATGGTTGTGTAAGGAGAACTTCATTGGATTGTAATGGAGATGGGTTTTTGAAGTATTCAGGGCTGAAATTGCCAGATACAGAAAGATCATGGTATAGTAGAAATATCAGCATTGAAGATTGTAAGATGTTGTGCTTGAAGAATTMTTCATGTATGGCTTATGCAGCTTTGGATATAAGTGAAGGCGCAAGTGGTTGTTTGATGTGGTTTGGTAATTTAAATGATATTAAAGCTCTGACTCCATATTCTCTTCAAGATATTTACATAAGGATGGCTGCTACAGAACTAGAAGCTATTCAGAAAAATAAATCACACAAATCGAACATCCGAAAGAAAAAGACGATCATCGTAGTTTGTGCGTTATCTTTTAGTGTTTTAATCATATGCTTGGCCTTCATCATCTTTAGATGGAAGATACGAAGAAAAGGTGTAATAAGTGACCAACAAGAGGAAGATCTACAATTGCCTTTGTTTGATATGTCCACAATTTCTTCTGGAACAAATAATTTTTCAACTGATAATATTTTGGGAAAAGGTGGCTTTGGTTCGGTATATAAGGATGGAAAAGAAATAGCAGTTAAGAGACTCTTACAGAATTCAAGCCAAGGAATCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAACTCCTAGGATGTTGCGTTTATGCAGAAGAAAGATTGCTAATCTATGAATTTATGCTTAACAAAAGCTTGGATTACTTCATATTTGATGAAAAGAAGAGCATGTTACTAGATTGGACAAGGCGCTTTGACATTATCAATGGGATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAAGCTGCCAATGTTTTGTTAGACGGTGAAATGAATACAAAGATTTCAGACTTTGGACTAGCCGGATATTTATCACCCGAGTACATAATTGATGGAGTTTACTCAACGAAATCCGATGTATTCACTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGGAGTAGAAATAGAGGATTCACTCATCAAGATCATAAATTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATACATCAAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTGCTTTGTGTGCAAAAAAGTCCAGATGACAGGCCAACCATGTCATCTGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGGTTCTTCGCAGAAAGAGAAAAATGA 2247 0.3725 MILLCFFLMMVASTAKDTIDSLQSISDGETIVSADEIYALGFFTPGTSKNRYVGIWFNKDPSKTVVWVANREKPLTDSSGVLKLNNTGILVLLDHNNSLIWSSNAKRSVLNPVAKLLNSGNLVVQERSNNGASKTDFVWQSFDYPCDTILPGQKLGINLKTGQNQYLTSWSSSDDPFPGRYTLQINIKGYPQVFIKEGANKRFRAGSWNGVQISGTPQLKGNPIFRYKYVSNEEEIYFMYELINNSNPHKVVLTPEGINQRSQWNPDTSSWTNLARLPADDCDYYETCGAYSSCNMDLCKINYKEEQGLSDGCVRRTSLDCNGDGFLKYSGLKLPDTERSWYSRNISIEDCKMLCLKNXSCMAYAALDISEGASGCLMWFGNLNDIKALTPYSLQDIYIRMAATELEAIQKNKSHKSNIRKKKTIIVVCALSFSVLIICLAFIIFRWKIRRKGVISDQQEEDLQLPLFDMSTISSGTNNFSTDNILGKGGFGSVYKDGKEIAVKRLLQNSSQGIQEFKNEVMHIAKLQHRNLVKLLGCCVYAEERLLIYEFMLNKSLDYFIFDEKKSMLLDWTRRFDIINGIARGLLYLHQDSRHRIVHRDLKAANVLLDGEMNTKISDFGLAGYLSPEYIIDGVYSTKSDVFTFGVLVLEIVSGSRNRGFTHQDHKFNLLGHAWKLFMEDKGYEIIYAPIRDTSNLSSMLRSIHVGLLCVQKSPDDRPTMSSVVQMLSSESTLPPPKMPGFFAEREK* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1374 748 Gene3D Phosphorylase Kinase; domain 1 454 551 - -
Amo18g1374 748 SMART serkin_6 480 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1374 748 Gene3D Transferase(Phosphotransferase) domain 1 552 734 - -
Amo18g1374 748 SMART blect_4 22 145 IPR001480 -
Amo18g1374 748 ProSiteProfiles Bulb-type lectin domain profile. 16 137 IPR001480 -
Amo18g1374 748 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 176 IPR036426 -
Amo18g1374 748 Pfam D-mannose binding lectin 64 170 IPR001480 -
Amo18g1374 748 ProSiteProfiles Protein kinase domain profile. 480 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1374 748 Gene3D - 9 142 IPR036426 -
Amo18g1374 748 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 5 747 - -
Amo18g1374 748 SUPERFAMILY Protein kinase-like (PK-like) 463 736 IPR011009 -
Amo18g1374 748 Pfam S-locus glycoprotein domain 203 296 IPR000858 GO:0048544
Amo18g1374 748 Pfam PAN-like domain 321 386 IPR003609 -
Amo18g1374 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Amo18g1374 748 PIRSF SRK 621 748 IPR024171 GO:0004674
Amo18g1374 748 PIRSF SRK 1 623 IPR024171 GO:0004674
Amo18g1374 748 Gene3D Hepatocyte Growth Factor 319 396 - -
Amo18g1374 748 CDD PAN_AP_plant 317 402 - -
Amo18g1374 748 PANTHER - 5 747 - -
Amo18g1374 748 Pfam Protein tyrosine and serine/threonine kinase 483 728 IPR001245 GO:0004672|GO:0006468
Amo18g1374 748 ProSiteProfiles PAN/Apple domain profile. 321 402 IPR003609 -
Amo18g1374 748 SMART ntp_6 321 401 IPR003609 -
Amo18g1374 748 CDD B_lectin 23 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1374 Amo-Chr18 25145451 25148682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1374 424 743 Receptor kinase-like Gene Family AT4G23190 46.875 2.81e-100 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo18g1374 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1374 - - ahf:112769704 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1374 18 25145451 25148682 Amo08g1489 08 24402230 24417362 hybridization