Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1364 ATGGAAAGGTTTCCTTTGTTTCTATTGTGCTTCTCATTGATGCACGATGCTGCCATTTCCAGTACAATAGAAAGCATTAGTACTACACAGTCCCTGACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGCAGTTGGATTCTTAAGTATTCCAGAAGGTTCCAAGAACCGTTACCTCGGGATATGGTACAATAAAGTGCCATCTAACACAGTAGCATGGATTGCCAATAGAAACGCTCCACTTAATGACTCGTCCGGGGTCTTGAAGATCACTGCCAATGGAACTCTTGCTCTTCATACTCATAACGATACCATCATTTGGCATTCCAACTCATCAGAATTCGCGCAGCGACCGGTTGCAGTGCTTTTAGATTCAGGGAACCTGGTTGTGAAGGAAGATGGGAGCAATGATGATGATTTGAAGAGTTTCATTTGGCAGAGTTTTGATTACCCTTATGACACGCTACTGCCAGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACAAGGTACCTAACATCACCGATTAGCTCTGATGATCCTTCTGAAGGTAGCTATACTTTGCAGCTTGATATTGTTGGATATCCACAATTTTGTATAAGAAATGGCGAATCCAGGACATATTGTGCTGGACCTTGGAACGGTGTTCGGTTCGGCGGAATTCCCCAGTTAAAACATAATACTATATACACCTATTACTTTGTTTACAACAAGGAAGAGATATATTACTCGTATGAGCTTGAGAATAGCGCTGTATATTCAAGGTTTGTGCTAACCGCAGACGGATCAATGATTCGTTATGTGTGGAGTGTTACGAATAAGAGTTGGAGTGTCTATCTAACATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTGGTTGCTTATTGACAGGATTTGAACCTAAAGTCCCTGAAGAATGGAATCAGACGGATTGGTCTGATGGTTGTGTTCGAATCAATAAATTGAATTGCCAGGATGATGGATTTGTACAGTTGTCTGGTGTGAAGTTACCAAACACACAAAGAGCATCAGGGTTAAATAATAGCATGAGTCTTGAGGAGTGTGCTAATTTATGCATGAAGAATTGCTCCTGCACGGCTTATGCTTCCTTGGATATCAGGAATGGAGGAAGTGGGTGTTTATTCTGGTATGATGAGCTGATAGATATTAGAGTTCTGAGTGATCCACAGCAAGATCTTTTTGTCAGAATGTCAAGGAAAGATATAGATGAAATTATGAAGTCAAAACATAAATCCAAGAACAAGAAGGTGCTGATTATTGCTTTCAGCTCAGTCATATCGGTAGGAATTTTGATCCTATGCCTATCCTTCATCGTATATAGAAGAAAGAAGAACAAGATAAACTATAGAAGCATGAGACACAYTACAGAAAGATATGCACATGCAATAGAAGACCAGGAGGAAGACCTTGATCTACCATTGTTTGATATGGCTACACTTATTTCTGCAACCAATAACTTCTCCACCAATAAAATATTAGGAAAAGGTGGTTATGGAACTGTTTATCAGGGTACACTGAAAGATGGAAGAGAAATAGCTGTTAAGAGGCTCTCAGAAAATTCTAGACAAGGTCTTCAGGAGTTCAAAAGTGAAGTGATGAATGTAGTCAAACTTCAGCACAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGGATGCTGATCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCACGCAACTACTTTGGCCTCAGCGTTTCCTTATTATTGTTGGGATTGCACGGGGTGTTCTCTATCTCCATCAAGATTCAAGACATAGAATAGTTCACAGAGATCTCAAGGCTAGCAATGTTCTACTAGATGACGAAATGAACGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTAAAGGAAATGAAAATGAAGCAAACACAACAAGAGTTGTTGGAACTTATGGCTATCTATCTCCAGAGTACCTAATTGATGGAATTTTCTCAACYAAGTCTGATGTTTATAGCTTTGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGGTTCAGCGATAAAAATCATCGCTTTAATCTTCTCGGACATGTATGGACACTCTTCATGGATGGTAATTGTTCAGAAATAATCGATCCGTCCATCAGAAATTCWTCCGAATTATCTGGAGTCATAAGAGTAKTTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGGCACATGCTCTTATGATGCTGAGTAGCGAATGCACACTGCCTCAACCGAAAATGCCAGGATTCTTTACCGAGAGAGATCCTGTTGGTGACACTTCTTCATCAAGCAATAWTAAACTAGTGTCATTTAATGAAGTCACTGTTACTGTGGTGCATCCACGGTAG 2490 0.4004 MERFPLFLLCFSLMHDAAISSTIESISTTQSLTDGDTMVSAGGTFAVGFLSIPEGSKNRYLGIWYNKVPSNTVAWIANRNAPLNDSSGVLKITANGTLALHTHNDTIIWHSNSSEFAQRPVAVLLDSGNLVVKEDGSNDDDLKSFIWQSFDYPYDTLLPGMKLGSDLTTGLTRYLTSPISSDDPSEGSYTLQLDIVGYPQFCIRNGESRTYCAGPWNGVRFGGIPQLKHNTIYTYYFVYNKEEIYYSYELENSAVYSRFVLTADGSMIRYVWSVTNKSWSVYLTLPTDICDDYGKCGAYGICNVANSPVCGCLLTGFEPKVPEEWNQTDWSDGCVRINKLNCQDDGFVQLSGVKLPNTQRASGLNNSMSLEECANLCMKNCSCTAYASLDIRNGGSGCLFWYDELIDIRVLSDPQQDLFVRMSRKDIDEIMKSKHKSKNKKVLIIAFSSVISVGILILCLSFIVYRRKKNKINYRSMRHXTERYAHAIEDQEEDLDLPLFDMATLISATNNFSTNKILGKGGYGTVYQGTLKDGREIAVKRLSENSRQGLQEFKSEVMNVVKLQHRNLVKLLGCCIQAEERMLIYEFMPNKSLDYFIFDKERSTQLLWPQRFLIIVGIARGVLYLHQDSRHRIVHRDLKASNVLLDDEMNAKISDFGLARSFKGNENEANTTRVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSDKNHRFNLLGHVWTLFMDGNCSEIIDPSIRNSSELSGVIRVXHVGLLCVQQNPEDRPSMAHALMMLSSECTLPQPKMPGFFTERDPVGDTSSSSNXKLVSFNEVTVTVVHPR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1364 829 CDD PAN_AP_plant 339 421 - -
Amo18g1364 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Amo18g1364 829 Pfam D-mannose binding lectin 72 177 IPR001480 -
Amo18g1364 829 SMART blect_4 29 153 IPR001480 -
Amo18g1364 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 218 IPR036426 -
Amo18g1364 829 Gene3D Phosphorylase Kinase; domain 1 485 587 - -
Amo18g1364 829 Pfam Protein tyrosine and serine/threonine kinase 514 779 IPR001245 GO:0004672|GO:0006468
Amo18g1364 829 CDD B_lectin 29 153 IPR001480 -
Amo18g1364 829 SMART serkin_6 512 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1364 829 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Amo18g1364 829 Gene3D Hepatocyte Growth Factor 340 421 - -
Amo18g1364 829 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Amo18g1364 829 PANTHER - 12 826 - -
Amo18g1364 829 Pfam Domain of unknown function (DUF3403) 784 829 IPR021820 GO:0004674
Amo18g1364 829 CDD STKc_IRAK 518 783 - -
Amo18g1364 829 Gene3D - 18 150 IPR036426 -
Amo18g1364 829 SUPERFAMILY Protein kinase-like (PK-like) 496 783 IPR011009 -
Amo18g1364 829 PIRSF SRK 2 829 IPR024171 GO:0004674
Amo18g1364 829 ProSiteProfiles Protein kinase domain profile. 512 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1364 829 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 826 - -
Amo18g1364 829 Gene3D Transferase(Phosphotransferase) domain 1 588 791 - -
Amo18g1364 829 Pfam PAN-like domain 342 408 IPR003609 -
Amo18g1364 829 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Amo18g1364 829 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Amo18g1364 829 SMART ntp_6 342 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1364 Amo-Chr18 24952637 24956802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1364 430 829 Receptor kinase-like Gene Family AT4G05200 46.154 8.04e-117 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1364 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1364 - - ahf:112769711 1432.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1364 18 24952637 24956802 Amo18g1364 18 24952637 24956802 ECH
Amo18g1364 18 24952637 24956802 Amo08g1487 08 24334050 24338088 hybridization
Amo13g2244 13 38296506 38300261 Amo18g1364 18 24952637 24956802 PCT