Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1362 ATGATCCGTCAAAATTCACCAAAAACTTATTTTTACCAAAAATTTGCTAGAAAAGAGATGACATGCATGCAAGAGTCTCGGCCTTCTCTTTCTTCTCTATTGAAGCCGCTGCTATCTCTGATGTTGGAGAAGAAGATAGTGTTAGGACTGCCCTGTACTTGCATTTCAACTTCTGGTTCTTTATCTATAAATCCTCAAACTTTAACAGCTTTATTACCAACTAAAGCTACAAAAATTAAAACAAAATACATCAAAATAATAATGGAACGGTTCACCTTGCTTCTGTTATGCTTCTCATTGCTGCATCATACAGCTATTTCTACAATCATAGACACTATTAGTACTACACAGTACCTCACTGATGGTGACACCATGCTTTCAGCTGATGCAAACTTTGCACTTGGATTCTTCGGTATACCAGAAAGTTCCATGAACCGTTACCTTGGAATATGGTACTATAAAGTGCCAACTAGGACAGTGGCATGGGTTGCCAACAGAAACACTCCACTTAATGACTCATTTGGAATCTTGAAGATCACTGACAAAGGAATTCTTGCTCTTCATAGTCATAACAATGCCATCATTTGGCATTCCAACTCGTCAAGATTCGTTCAGCGACCGGTTGCAGTGCTTTTGGATTCAGGGAACCTCATTGTGAAGGAATATGGGAGCAACAACAATGACTTAAAAAGCTTTCTTTGGCAGAGTTTCGATTACCCTTTTGACACAATGCTGCCAGGGATGAAGTTCGGAAGCGACTTAAGTACAGGCTTGAATAGGTACTTAACATCTCAAATTAGCCCCGATGATCAATCTAAAGGTAACTATACTTTTCAGCTTGATATTGTTGGATATCCAGAATTATGTATAAGAAACGGTGAATCCAAGTCCTTTTCTAGTGGATCCTGGAATGGTCTTCGATTTGGTGGAATTCCCCGGTTAAAACAGAATACTATATACCACTACTACTTTGTTTACAGTAAGGAAGAGATATATTATACATTTGAGCTTCTTAATAGCTCAATGTATTCAAGATTTGTGCTATCTGCGAATGGAATCATGACACGTTATGTTTGGAGTTTGAGGAATCAAAGTTGGACACCCTACCTAACATTGCCAAATGATATCTGTGATAGTTATGGTAAATGTGGACCATATGGTAAATGTAATATAGACAACTCCCCTCCATGTGATTGCTTGAGCGGAACTGTACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTATAATGGTTGTATTAGAAGTAATCCGCTAAGTTGCCATGGAGATGGATTCAAAAAGTTTACTGGTCTGAAGCTGCCTGATACACAGAAAGCATCATGGTTAAATACTAGCATGAGTCTTGACGAGTACGCGAAGTTCTGCCTGAAAAATTGCTCCTGCATGGCTTATGCTGCATTGGATATCAGCAAAGGGGCAAGTGGGTGTTTAATGTGGCATGATGAGCTGATAGATATTAGAGTGCTGAGTGATCCACAACAAGATCTTTATGTTAGAATGTCCAAGAAAGATTCAGATGAAGATGAAAAATCAAAGGGTGGATCTGATATCCCGAAGATGCAGATTATTGTTTGCAGCTCAGTCTTATTTATAGGAATGATGATGATCCTATGCATTTCCTTGATCCTGTATAGAAGAAAGAAAAACCAGAAAAACTATAGGAACATGAGAGGCAACCCAGAAGAGCATCAGGAGGAAGAACTAGATCTACCATATTTTGATATGGCTACTGTTGAGGAGTCTACACTTATTTCTGCAACCAACAACTTCTCCGCCAATAATATATTGGGAAAAGGCGGTTTTGAAGCTGTTTACAAGGGTGTGTTGGAAGATGGAAGAGAAATAGCAGTTAAGAGGCTTTCAGAAGATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTTATGCATGTAGTCAAACTTCAGCACAGGAATTTGGTGAGGCTTCTAGGATGTTGCATTCAAGCAGAGGAGAGGATTCTAGTCTATGAGTTTATGCCAAATAAAAGCTTGGACTACTTCATATTTGAGAGAGGCAAGATATTAGACTGGCCTAAGCGGTTCATTATTATCATTGGGATTGCACGAGGCCTTCTCTACCTCCATCAAGATTCAAGRCATAGAATAGTCCATAGAGATCTTAAGGCTGGCAATGTTTTGTTAGATGAGGAAATAAATGCGAAAATCTCTGACTTTGGACTAGCCAGAACCCTTGTAGGAAATGAAAATGAAGCAAACACGGCAACTGTTGTCGGAACCTATGGCTATCTATCTCCAGAGTACCTTATCGATGGAATATTCTCAACAAAATCTGATGTCTATAGCTTTGGAGTGCTGGTGTTAGAGATAGTTACTGGAAAGAGAAATAGAGGCTTCAACAATAAAAATCATGGTTTTAATCTTCTCGGACATGTTTGGACTCTCTTCATAGATGGTAAGTGTTTAGAAATAGTTGATGGATCAATCAGAGATGACGACGCATCGAATTTATGTGGAGTCATAAGAGCGATTCATGTTGGTCTACTATGCGTCCAAAGAAGTCCAGAGGATAGGCCAAGCATGTCACATGCGCTTATGATGTTGAGTAGTGAATGGCCACTGCCTCAACCGAAAATGCCGGGCTTCTTTACTGAGAGAGATCCTGTTGGTGACACTTCTTCATCAGGCAACACTAAAGTAGTGTCAATTAATGAAGTCACAATTACCGTTTCCACTGCCATAGAAAGCATTACTATTACACAGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGTAGCTGGATTCTGCAGTATCCCAGAAAGTTCCAAGAACCGTTACGTTGGAATATGGTACAGTAAAGTGCCATCTAGGACAATAGTATGGATTGCCAATAGAAACACTCCACTTAATGACTCATCCGGGGTCTTGAAGATCACTGGCAATGGAACTCTTGCTCTTTATAGGAATCTCATTGTGAAGGAAGATGGGAGCAATGATGATGATTTGAAGAGTTTTATTTGGCAGAGTTTTGATTACCCTTATAACACGCTACTGCCGGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACAAGGTACCTAATATCGCCGATTAGTTCTGATGACCCTTCTGAAGGTAGCTATACTCATCAGCTTAATAGTGTTGGATATCCTCAATTATGTACAAAAGATGGCCAATCCATGACATATAGTAGTGGATCTTGGAACGGTGTTCGGTTCGGCGGAATTCCCCAGTTAAAACATAATACTATATACACCTATTACTTTGTTTACAACAAGGAAGAGATATATTACTCGTATGAGCTTGAGAATAGCGCTGTATATTCAAGGTTTGTGCTAACCGCAGACGGATCAATGATTCGTTATGTGTGGAGTGTTACGAATAAGAGTTGGAGTGTCTATCTAACATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTAATGAATGGAATCAGACGGATTGGTCTGATGGTTGTGTTCGAATCAATAAATTGAATTGCCAGGATGATGGATTTGTACAGTTGTCTGGTTTGAAGTTACCAAACACACAAAGAGCATCAGGGTTAAATAATAGCATGAGTCTTGAGGAGTGTGCTAATTTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTTCCTTGGATATCAGGAATGGAGGAAGAGGGTGTTTATTCTGGTACGATGAGCTGATAGATATTAGAGTTCTGAGTGATCCACAGCAAGATCTTTTTGTCAGAATGTCAAGGAAAGATATAGATGAAATTAAGAAGTCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCTTCCATCACAGTCATATCTGTAGGAATTTTGATCCTATGCCTATCCTTCACCCTATACAGAAGAAAGAAGCAGCAGATAAACTATGGAAACATGAGAGACAGTCCAGAAAGATATGCACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCATTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATACTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAGAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCGGTAAATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGGTTTAAGCATGCAACTAGTTTGGTCTCAGCGTTTCCTTTTTATCATTGGGATTGCACGGGGCGTTCTCTATCTCCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGATGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTTGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACGAAGTCTGATGTTTATAGCTTTGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGGTTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGATAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCCAGAGTCATAAGAGCAATTCATGTGGGTCTACTTTGCGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTTGCATGTTCTTATGATGCTGAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCTTGTTGGTGACACTTCATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAATCTCAATTAAAACTCGCACATACTAA 5037 0.3935 MIRQNSPKTYFYQKFARKEMTCMQESRPSLSSLLKPLLSLMLEKKIVLGLPCTCISTSGSLSINPQTLTALLPTKATKIKTKYIKIIMERFTLLLLCFSLLHHTAISTIIDTISTTQYLTDGDTMLSADANFALGFFGIPESSMNRYLGIWYYKVPTRTVAWVANRNTPLNDSFGILKITDKGILALHSHNNAIIWHSNSSRFVQRPVAVLLDSGNLIVKEYGSNNNDLKSFLWQSFDYPFDTMLPGMKFGSDLSTGLNRYLTSQISPDDQSKGNYTFQLDIVGYPELCIRNGESKSFSSGSWNGLRFGGIPRLKQNTIYHYYFVYSKEEIYYTFELLNSSMYSRFVLSANGIMTRYVWSLRNQSWTPYLTLPNDICDSYGKCGPYGKCNIDNSPPCDCLSGTVPKVPEEWNQADWYNGCIRSNPLSCHGDGFKKFTGLKLPDTQKASWLNTSMSLDEYAKFCLKNCSCMAYAALDISKGASGCLMWHDELIDIRVLSDPQQDLYVRMSKKDSDEDEKSKGGSDIPKMQIIVCSSVLFIGMMMILCISLILYRRKKNQKNYRNMRGNPEEHQEEELDLPYFDMATVEESTLISATNNFSANNILGKGGFEAVYKGVLEDGREIAVKRLSEDSRQGLQEFKSEVMHVVKLQHRNLVRLLGCCIQAEERILVYEFMPNKSLDYFIFERGKILDWPKRFIIIIGIARGLLYLHQDSRHRIVHRDLKAGNVLLDEEINAKISDFGLARTLVGNENEANTATVVGTYGYLSPEYLIDGIFSTKSDVYSFGVLVLEIVTGKRNRGFNNKNHGFNLLGHVWTLFIDGKCLEIVDGSIRDDDASNLCGVIRAIHVGLLCVQRSPEDRPSMSHALMMLSSEWPLPQPKMPGFFTERDPVGDTSSSGNTKVVSINEVTITVSTAIESITITQSLTDGDTMVSAGGTFVAGFCSIPESSKNRYVGIWYSKVPSRTIVWIANRNTPLNDSSGVLKITGNGTLALYRNLIVKEDGSNDDDLKSFIWQSFDYPYNTLLPGMKLGSDLTTGLTRYLISPISSDDPSEGSYTHQLNSVGYPQLCTKDGQSMTYSSGSWNGVRFGGIPQLKHNTIYTYYFVYNKEEIYYSYELENSAVYSRFVLTADGSMIRYVWSVTNKSWSVYLTLPTDICDDYGKCGAYGICNVANSPNEWNQTDWSDGCVRINKLNCQDDGFVQLSGLKLPNTQRASGLNNSMSLEECANLCMKNCSCTAYASLDIRNGGRGCLFWYDELIDIRVLSDPQQDLFVRMSRKDIDEIKKSSHKSKIRKLQIIASITVISVGILILCLSFTLYRRKKQQINYGNMRDSPERYAHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLRDGREIAVKRLSVNSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFGLSMQLVWSQRFLFIIGIARGVLYLHQDSRHRIVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEDNCSEIVDPSIRNSSDLSRVIRAIHVGLLCVQQNPEDRPSMLHVLMMLSSECTLLQPKMPGFFTERDLVGDTSSSKSELVSFNEISIKTRTY* 1679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1362 1678 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1362 1678 CDD PAN_AP_plant 1191 1273 - -
Amo18g1362 1678 Gene3D Transferase(Phosphotransferase) domain 1 1441 1642 - -
Amo18g1362 1678 Gene3D Transferase(Phosphotransferase) domain 1 674 874 - -
Amo18g1362 1678 CDD STKc_IRAK 604 869 - -
Amo18g1362 1678 PANTHER - 910 993 - -
Amo18g1362 1678 SUPERFAMILY Protein kinase-like (PK-like) 1350 1643 IPR011009 -
Amo18g1362 1678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Amo18g1362 1678 Gene3D Phosphorylase Kinase; domain 1 559 673 - -
Amo18g1362 1678 Gene3D Phosphorylase Kinase; domain 1 1328 1440 - -
Amo18g1362 1678 Pfam Protein tyrosine and serine/threonine kinase 601 864 IPR001245 GO:0004672|GO:0006468
Amo18g1362 1678 Pfam Protein tyrosine and serine/threonine kinase 1368 1632 IPR001245 GO:0004672|GO:0006468
Amo18g1362 1678 PANTHER - 97 911 - -
Amo18g1362 1678 PANTHER - 995 1675 - -
Amo18g1362 1678 Pfam D-mannose binding lectin 995 1043 IPR001480 -
Amo18g1362 1678 Pfam D-mannose binding lectin 159 264 IPR001480 -
Amo18g1362 1678 Pfam S-locus glycoprotein domain 1077 1174 IPR000858 GO:0048544
Amo18g1362 1678 Pfam S-locus glycoprotein domain 298 406 IPR000858 GO:0048544
Amo18g1362 1678 CDD STKc_IRAK 1371 1634 - -
Amo18g1362 1678 Gene3D Hepatocyte Growth Factor 1192 1273 - -
Amo18g1362 1678 Pfam PAN-like domain 428 494 IPR003609 -
Amo18g1362 1678 Pfam PAN-like domain 1194 1260 IPR003609 -
Amo18g1362 1678 SMART serkin_6 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1362 1678 SMART serkin_6 1365 1639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1362 1678 SUPERFAMILY alpha-D-mannose-specific plant lectins 965 1047 IPR036426 -
Amo18g1362 1678 ProSiteProfiles PAN/Apple domain profile. 1194 1275 IPR003609 -
Amo18g1362 1678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1484 1496 IPR008271 GO:0004672|GO:0006468
Amo18g1362 1678 CDD PAN_AP_plant 425 507 - -
Amo18g1362 1678 SUPERFAMILY alpha-D-mannose-specific plant lectins 159 305 IPR036426 -
Amo18g1362 1678 ProSitePatterns Protein kinases ATP-binding region signature. 1371 1393 IPR017441 GO:0005524
Amo18g1362 1678 CDD B_lectin 921 1019 IPR001480 -
Amo18g1362 1678 ProSiteProfiles PAN/Apple domain profile. 428 509 IPR003609 -
Amo18g1362 1678 ProSiteProfiles Protein kinase domain profile. 1365 1645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo18g1362 1678 ProSiteProfiles Bulb-type lectin domain profile. 110 232 IPR001480 -
Amo18g1362 1678 Gene3D - 105 237 IPR036426 -
Amo18g1362 1678 Gene3D - 910 1082 IPR036426 -
Amo18g1362 1678 SMART ntp_6 428 508 IPR003609 -
Amo18g1362 1678 SMART ntp_6 1194 1274 IPR003609 -
Amo18g1362 1678 Pfam Domain of unknown function (DUF3403) 870 911 IPR021820 GO:0004674
Amo18g1362 1678 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 97 911 - -
Amo18g1362 1678 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 995 1675 - -
Amo18g1362 1678 CDD B_lectin 116 240 IPR001480 -
Amo18g1362 1678 SUPERFAMILY Protein kinase-like (PK-like) 584 869 IPR011009 -
Amo18g1362 1678 SMART blect_4 116 240 IPR001480 -
Amo18g1362 1678 SMART blect_4 921 1019 IPR001480 -
Amo18g1362 1678 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 910 993 - -
Amo18g1362 1678 ProSiteProfiles Bulb-type lectin domain profile. 915 1055 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1362 Amo-Chr18 24908750 24923802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo18g1362 494 910 Receptor kinase-like Gene Family AT4G23220 43.750 5.26e-99 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo18g1362 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1362 - - ahf:112769704 1997.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g1362 18 24908750 24923802 Amo18g1362 18 24908750 24923802 ECH